Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20lenticulata_20[genbank_20GCA_5F002179805.1_202017-06- 08] 10,743 sequences; 75,569,356 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq9739 109 6e-22 >seq9739 Length=644 Score = 109 bits (120), Expect = 6e-22 Identities = 151/212 (71%), Gaps = 26/212 (12%) Strand=Plus/Plus Query 5 CCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC------TTTGCT---- 54 |||| | ||||| |||||||||||||| ||||||||| ||| ||| || Sbjct 426 CCAGATCGTTTACCGTGAAAAAATTAGAGTGTTCAAAGCGGGCAGATATTTTTCCTGCCA 485 Query 55 -CGAATACATTACCATGGAATAATAGAATAGGACG-TGCGGTTCTATTTT--GTAGGTTT 110 ||||||||||| ||||| ||||| ||||||||| || | ||||||| || ||||| Sbjct 486 CCGAATACATTAGCATGGGATAATGGAATAGGACCCTGACCTCCTATTTTCAGTTGGTTT 545 Query 111 CTAGGACCGCCCG------------TAATGATAAATACGGATAGTCGGGGGTGTCAGTAT 158 || || | ||||||| |||| ||||||| ||||| | | ||| Sbjct 546 TGTTTACAGCGAGGTTATATCAGGGTAATGATTAATAGGGATAGTTGGGGGCATTAATAT 605 Query 159 TCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190 | |||||||| ||||||||||||||||||||| Sbjct 606 TTAATTGTCAGAGGTGAAATTCTTGGATTTAT 637 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511946714720