Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20lugdunensis_20[genbank_20GCA_5F000826425.1_202015-01- 07] 67,459 sequences; 99,417,109 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq16219 102 9e-20 seq13148 102 9e-20 seq31197 96.9 4e-18 seq29545 96.9 4e-18 seq25006 96.9 4e-18 seq22439 96.9 4e-18 seq20685 96.9 4e-18 seq15478 96.9 4e-18 seq11323 96.9 4e-18 seq6584 96.9 4e-18 seq3878 96.9 4e-18 seq564 96.9 4e-18 seq26314 93.3 5e-17 seq9656 91.5 2e-16 seq1928 91.5 2e-16 seq11413 89.7 6e-16 seq3500 87.8 2e-15 seq19738 86.0 7e-15 seq18807 86.0 7e-15 seq959 75.2 1e-11 seq8575 73.4 4e-11 >seq16219 Length=127 Score = 102 bits (112), Expect = 9e-20 Identities = 59/61 (97%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 2 TACACCATTCATGCAGGTCGGAACTCACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 61 Query 173 A 173 | Sbjct 62 A 62 >seq13148 Length=70 Score = 102 bits (112), Expect = 9e-20 Identities = 59/61 (97%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 69 TACACCATTCATGCAGGTCGGAACTCACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 10 Query 173 A 173 | Sbjct 9 A 9 >seq31197 Length=127 Score = 96.9 bits (106), Expect = 4e-18 Identities = 58/61 (95%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 |||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||| Sbjct 82 TACACCATTCATGCAGGTAGGAACTCACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 23 Query 173 A 173 | Sbjct 22 A 22 >seq29545 Length=127 Score = 96.9 bits (106), Expect = 4e-18 Identities = 58/61 (95%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 |||||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||| Sbjct 120 TACACCATTCATGCAGGTCGGAACTCACCCGACAAGGAATTTCGCTACCTTAGGACAGTT 61 Query 173 A 173 | Sbjct 60 A 60 >seq25006 Length=127 Score = 96.9 bits (106), Expect = 4e-18 Identities = 58/61 (95%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 |||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||| Sbjct 45 TACACCATTCATGCAGGTCTGAACTCACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 104 Query 173 A 173 | Sbjct 105 A 105 >seq22439 Length=127 Score = 96.9 bits (106), Expect = 4e-18 Identities = 58/61 (95%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 90 TACACCATTCATGCAGGTCGGAACTCGCCCGACAAGGAATTTCGCTACCTTAGGACCGTT 31 Query 173 A 173 | Sbjct 30 A 30 >seq20685 Length=127 Score = 96.9 bits (106), Expect = 4e-18 Identities = 58/61 (95%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 |||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct 93 TACACCATTCATGCAGGTCGGAACTCACCAGACAAGGAATTTCGCTACCTTAGGACCGTT 34 Query 173 A 173 | Sbjct 33 A 33 >seq15478 Length=127 Score = 96.9 bits (106), Expect = 4e-18 Identities = 58/61 (95%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 |||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||||| Sbjct 29 TACACCATTCATGCAGGTCGGAACTCACCCGACAATGAATTTCGCTACCTTAGGACCGTT 88 Query 173 A 173 | Sbjct 89 A 89 >seq11323 Length=127 Score = 96.9 bits (106), Expect = 4e-18 Identities = 58/61 (95%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 |||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||| Sbjct 92 TACACCATTCATGCAGGTCGGAACTCACACGACAAGGAATTTCGCTACCTTAGGACCGTT 33 Query 173 A 173 | Sbjct 32 A 32 >seq6584 Length=127 Score = 96.9 bits (106), Expect = 4e-18 Identities = 58/61 (95%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 |||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct 49 TACACCATTCATGCATGTCGGAACTCACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 108 Query 173 A 173 | Sbjct 109 A 109 >seq3878 Length=127 Score = 96.9 bits (106), Expect = 4e-18 Identities = 58/61 (95%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 ||||| |||| |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 69 TACACAATTCATGCAGGTCGGAACTCACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 10 Query 173 A 173 | Sbjct 9 A 9 >seq564 Length=127 Score = 96.9 bits (106), Expect = 4e-18 Identities = 58/61 (95%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 |||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||| Sbjct 44 TACACCATTCATGCAGGTCGTAACTCACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 103 Query 173 A 173 | Sbjct 104 A 104 >seq26314 Length=64 Score = 93.3 bits (102), Expect = 5e-17 Identities = 54/56 (96%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 168 |||||||||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct 56 TACACCATTCATGCAGGTCGGAACTCACCCGACAAGGAATTTCGCTACCTTAGGAC 1 >seq9656 Length=65 Score = 91.5 bits (100), Expect = 2e-16 Identities = 53/55 (96%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 119 ATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||| |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1 ATTCATGCAGGTCGGAACTCACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 55 >seq1928 Length=127 Score = 91.5 bits (100), Expect = 2e-16 Identities = 53/55 (96%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 167 |||||||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct 73 TACACCATTCATGCAGGTCGGAACTCACCCGACAAGGAATTTCGCTACCTTAGGA 127 >seq11413 Length=127 Score = 89.7 bits (98), Expect = 6e-16 Identities = 52/54 (96%), Gaps = 0/54 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGG 166 |||||||||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct 74 TACACCATTCATGCAGGTCGGAACTCACCCGACAAGGAATTTCGCTACCTTAGG 127 >seq3500 Length=127 Score = 87.8 bits (96), Expect = 2e-15 Identities = 51/53 (96%), Gaps = 0/53 (0%) Strand=Plus/Minus Query 121 TCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173 || |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 127 TCATGCAGGTCGGAACTCACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 75 >seq19738 Length=68 Score = 86.0 bits (94), Expect = 7e-15 Identities = 49/50 (98%), Gaps = 0/50 (0%) Strand=Plus/Plus Query 124 TGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1 TGCAGGTCGGAACTCACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 50 >seq18807 Length=127 Score = 86.0 bits (94), Expect = 7e-15 Identities = 49/50 (98%), Gaps = 0/50 (0%) Strand=Plus/Plus Query 124 TGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1 TGCAGGTCGGAACTCACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 50 >seq959 Length=127 Score = 75.2 bits (82), Expect = 1e-11 Identities = 76/103 (74%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 54 GCATCTTCACCGATACTACAATTTCACTGAGCTCACGGTTGAGACAGNNNNNNNNNNNNT 113 |||||||||| | | | ||||||||| | | | ||||||||| | Sbjct 25 GCATCTTCACAGCAAATTTAATTTCACTAGGTTAATACTTGAGACAGTAGGGAAGTCGTT 84 Query 114 ACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCG 156 ||||||||| |||||||||||||| |||||||||||||||||| Sbjct 85 ACACCATTCATGCAGGTCGGAACTCACCCGACAAGGAATTTCG 127 >seq8575 Length=127 Score = 73.4 bits (80), Expect = 4e-11 Identities = 43/45 (96%), Gaps = 0/45 (0%) Strand=Plus/Minus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGC 157 |||||||||| |||||||||||||| ||||||||||||||||||| Sbjct 45 TACACCATTCATGCAGGTCGGAACTCACCCGACAAGGAATTTCGC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546842399841