Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20mauritaniensis_20[genbank_20GCA_5F000826465.1_202015- 01-07] 67,233 sequences; 106,836,370 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq62568 228 1e-57 >seq62568 Length=2299 Score = 228 bits (252), Expect = 1e-57 Identities = 217/276 (79%), Gaps = 24/276 (9%) Strand=Plus/Plus Query 66 CCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCC-------TTTGCT--- 115 |||| | ||||| |||||||||||||| ||||||||||||| ||| || Sbjct 1946 CCAGATCGTTTACCGTGAAAAAATTAGAGKGTTCAAAGCAGGCAGATTCAATTTTCTGCC 2005 Query 116 --CGAATACATTAGCATGGAATAATAGAATAGGACG-TGCGGTTCTATTTT--GTTGGTT 170 ||||||||||||||||| ||||| ||||||||| || | ||||||| ||||||| Sbjct 2006 ACCGAATACATTAGCATGGGATAATGGAATAGGACCCTGTCCTCCTATTTTCAGTTGGTT 2065 Query 171 T--------CTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAA 222 | | ||||| ||||||||||||||||||||| ||||| | | |||| || Sbjct 2066 TTGGCAGCGCGAGGACTAGGGTAATGATTAATAGGGATAGTTGGGGGCATTAATATTTAA 2125 Query 223 TTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAA 282 |||||||||||||||||||||||||||| |||| ||||| |||||||||| | |||| Sbjct 2126 TTGTCAGAGGTGAAATTCTTGGATTTATGAAAGATTAACTTCTGCGAAAGCATCTGCCAA 2185 Query 283 GGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 |||||||||||||||||| |||||||||||||||| Sbjct 2186 GGATGTTTTCATTAATCA-AGAACGAAAGTTAGGGG 2220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914584683584