Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20mauritaniensis_20[genbank_20GCA_5F000826465.1_202015- 01-07] 67,233 sequences; 106,836,370 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq42963 107 2e-21 >seq42963 Length=10355 Score = 107 bits (118), Expect = 2e-21 Identities = 133/180 (74%), Gaps = 9/180 (5%) Strand=Plus/Plus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84 |||| |||||| || | | ||| || ||||| |||||||||||| ||| | | | |||| Sbjct 4972 AAACCGACACAGGTGGACTGGTAGAGTATACCAAGGCGCTTGAGAGAACTATGTTGAAGG 5031 Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCC------TACCCA--GAAA 136 |||| ||||| | | ||||||||||||||||| ||| ||| ||| || | Sbjct 5032 AACTCGGCAATTTACCTCTGTAACTTCGGGATAAGGGGGCCCTCTATGTACGCAAGTGCA 5091 Query 137 TGGGAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 | || ||| ||| ||| ||| |||||||||||| ||||||||||||||| ||| || Sbjct 5092 TAGG-GGGGGCACAGACCAGGGGGTGGCAACTGTTTAGCAAAAACACAGGGCTCTGCGAA 5150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 530854018982