Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20mauritaniensis_20[genbank_20GCA_5F000826465.1_202015- 01-07] 67,233 sequences; 106,836,370 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq42963 179 7e-43 >seq42963 Length=10355 Score = 179 bits (198), Expect = 7e-43 Identities = 209/281 (74%), Gaps = 1/281 (0%) Strand=Plus/Plus Query 59 ATACTACCCCTGTTGTATTGGATTTCTAACCGGACGACGTATAACCGTTGACGGGACAGT 118 |||| |||| | || ||||| |||||||| ||| || ||| |||||||| Sbjct 5510 ATACCACCCTAATGGTTATGGATATCTAACCGCGTTCCGT-TATCCGGAACCGGGACAGC 5568 Query 119 GTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAG 178 | | |||||||||||||||||||||||||||||||||||||||||||||| | | | Sbjct 5569 GCATGGTGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGTGCGATG 5628 Query 179 ATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTTTGACTG 238 || ||||| || ||||| | | || ||| || |||| ||| || |||||| Sbjct 5629 GTAGGCTCAGAACGGTCGGAAATCGTTCGTCGAGTATAATGGCATAAGCCTGCCTGACTG 5688 Query 239 CGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATG 298 ||| || |||||| ||||| |||||||||||| | || |||||||| ||| | | || Sbjct 5689 CGAGACTAACAAGTCGAGCAGAGACGAAAGTCGGTCATAGTGATCCGGTGGTCCCGCGTG 5748 Query 299 GAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 || |||| |||||| ||||||||||| ||| | ||||||| Sbjct 5749 GATGGGCCATCGCTCAACGGATAAAAGGTACGCCGGGGATA 5789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981739503008