Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20mauritaniensis_20[genbank_20GCA_5F000826465.1_202015- 01-07] 67,233 sequences; 106,836,370 total letters Query= AAMG01001182.1 Length=261 Score E Sequences producing significant alignments: (Bits) Value seq38831 95.1 2e-17 >seq38831 Length=76060 Score = 95.1 bits (104), Expect = 2e-17 Identities = 127/174 (73%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 50 CGTCCAGGCCCGGTGCCGGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGC 109 ||| |||| ||| | || |||||||| ||||| || |||||||| || || |||| Sbjct 17879 CGTTCAGGATCGGCGAGGGGCCTTCTTCCCAAACCTTTTGATGACGACGCTGGAGAGAGC 17820 Query 110 AATCGCGGTCGCCCAGGTGGATGGCGTGGCCCTGGCCGTCGGACAGTACTTGCACTTCCA 169 ||||||| ||||| || ||||| || ||| |||| ||| ||| | || | ||| | Sbjct 17819 AATCGCGTTCGCCGAGATGGATCGCACCGCCGCGGCCATCGCCCAGAATCTGGATTTCGA 17760 Query 170 CGTGACGTGGGTTGGTCAGGTACTTTTCCAGGTAGACC-ATCGGGTTGCCGAAC 222 ||||| || ||| || ||||||||||| |||||| ||| || ||||||| Sbjct 17759 TATGACGGGGTTTGCCGAGATACTTTTCCAGATAGACCGATC-CGTCGCCGAAC 17707 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 735520628710