Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20mauritaniensis_20[genbank_20GCA_5F000826465.1_202015- 01-07] 67,233 sequences; 106,836,370 total letters Query= AAMG01001377.1 Length=151 Score E Sequences producing significant alignments: (Bits) Value seq42969 82.4 6e-14 >seq42969 Length=16040 Score = 82.4 bits (90), Expect = 6e-14 Identities = 93/121 (77%), Gaps = 4/121 (3%) Strand=Plus/Minus Query 33 CGCGCCCAGGTCGGCACTGACAACGT-AT-TGCTTGGCCTGTCCGGCGGCGTTGACTCCT 90 ||||| ||| |||||| | ||| || || ||| |||||||| |||||||| || || | Sbjct 15298 CGCGCGCAGATCGGCAAGGGCAAGGTGATCTGC--GGCCTGTCGGGCGGCGTCGATTCAT 15241 Query 91 CGGTTGTAGCGGCACTGCTGCACAAGGCCATCGGCGACCAACTGACCTGCGTGTTTGTCG 150 | || | ||| ||| | ||| |||||||||| || || || |||||||||||||||| Sbjct 15240 CCGTGGCCGCGATCCTGATTCACGAGGCCATCGGTGATCAGCTCACCTGCGTGTTTGTCG 15181 Query 151 A 151 | Sbjct 15180 A 15180 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 383749893240