Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20mauritaniensis_20[genbank_20GCA_5F000826465.1_202015- 01-07] 67,233 sequences; 106,836,370 total letters Query= AAMG01001688.1 Length=394 Score E Sequences producing significant alignments: (Bits) Value seq38569 111 4e-22 >seq38569 Length=123680 Score = 111 bits (122), Expect = 4e-22 Identities = 175/246 (71%), Gaps = 6/246 (2%) Strand=Plus/Plus Query 1 CGATGGTCAGCAACTCGCCGCCCACCTGGGTCCACGCCAGGCCAGTGACCTGACCGACTT 60 ||||||| |||| ||||||||| || | ||||||||||| || || || || || | Sbjct 98276 CGATGGTGAGCAGCTCGCCGCCGACGTCCGTCCACGCCAGACCGGTCACGACGCCAACCT 98335 Query 61 GATCCT-GCTGCTCGGCCAGGCCGTAGCTGAATTTGCGCACGCCGAGGAAGTGCTCCAGG 119 | || | ||| |||| | |||||| | | || ||||||||||||| | ||| | Sbjct 98336 GGTCGTCGCT-CTCGATCTCGCCGTAACGATACTTCGGCACGCCGAGGAACTCCTCGACC 98394 Query 120 GAGTCGGCCGTGACCTTCACCGAGAAGCGTTTTTCCAGCGCAT--GTTCCTTGACCGCCT 177 | | || |||||||||||| || || ||| || ||| ||||| ||||||| Sbjct 98395 ACGGCCGCAGTGACCTTCACC--GACTTCTTCTTCGAGATCATCAACTCCTTCACCGCCT 98452 Query 178 TGCGGCAGATCTTCGCGATCTGGCGCTCCAGGCCACGCACACCGGCTTCGCGGGTGTAGT 237 ||||| || ||| |||| ||||| ||| |||||| || ||||||||||||||| Sbjct 98453 TGCGGGCGAGTGTCGAAATCTCACGCTCGAGGTTACGCACGCCCGCTTCGCGGGTGTAGC 98512 Query 238 AGCGGA 243 ||||| Sbjct 98513 GGCGGA 98518 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1157621172928