Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20mauritaniensis_20[genbank_20GCA_5F000826465.1_202015- 01-07] 67,233 sequences; 106,836,370 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq42963 210 5e-52 >seq42963 Length=10355 Score = 210 bits (232), Expect = 5e-52 Identities = 300/415 (72%), Gaps = 18/415 (4%) Strand=Plus/Minus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 ||||||||||| |||||||||||||||| ||| || |||| | | ||| ||||| || Sbjct 4845 CGACTACGCCTTTCGGCCTCGCCTTAGGGACCGGCTAACCCTGCGAAGATTAACTTTACG 4786 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCC-GTCACACGCTACTCATGCCT 119 | |||||||||||| |||||| | | | ||| | || || |||||||||| Sbjct 4785 CAGGAACCCTTGGACTTTCGGCGACAGTGTCTTTCACACTGTTTGTCGTTACTCATGCCA 4726 Query 120 GCATTCTCACT-CGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCA--CTGACA 176 |||||| |||| | || | ||||| | | |||| | | | | || || ||| Sbjct 4725 GCATTCGCACTTCTGAT-ACCTCCAGG-CGCTCTCACGAGTCGCCCTTCGCAGGCTTACA 4668 Query 177 CGACGCTCCCCTACCCAACCACACA---GGTTGCCAC----AGCTTCGGCGGATAACTTA 229 ||||||| ||||| || | || | ||| ||||||||| | ||| Sbjct 4667 GAACGCTCCGCTACCGCGTGACCCTTGCGGATCACACCCTAAGCTTCGGCTCGTGGCTTG 4608 Query 230 AGCCCCGCTACATTATCGGCGCGGAATCACTT-----GACCAGTGAGCTATTACGCACTC 284 ||||||| ||||| ||||||| | | | ||| |||||||||||| |||||| || Sbjct 4607 AGCCCCGTTACATCTTCGGCGCAGGAACCCTTATTTAGACCAGTGAGCTGTTACGCTTTC 4548 Query 285 TTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTT 344 ||| ||||||||||||||| ||||||||||||||||||| | | | ||||||||||| Sbjct 4547 TTTAAAGGATGGCTGCTTCTAAGCCAACCTCCTGGTTGTTTTGGGATTCCCACATCCTTT 4488 Query 345 CCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTC 399 |||||| || ||| | |||||||||||||||| | || ||| |||||||||||| Sbjct 4487 CCCACTTAGCCACGAATTAGGGGCCTTAGCTGTAGGTCCGGGTTGTTTCCCTCTC 4433 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1176808264192