Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20mauritaniensis_20[genbank_20GCA_5F000826465.1_202015- 01-07] 67,233 sequences; 106,836,370 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq42963 104 2e-20 >seq42963 Length=10355 Score = 104 bits (114), Expect = 2e-20 Identities = 123/163 (75%), Gaps = 4/163 (2%) Strand=Plus/Minus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACA-CTTTCTGGGATTAGCTCCCCCTCGC 59 |||||||||||| ||||||| ||| || || |||| || |||| || | || Sbjct 2227 TCGAGTTGCAGAGCCCAATCCGAACT--GAGACGGCTTTTTGAGATTTGCGAAGGGTTGC 2170 Query 60 GGGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCC 119 || ||| ||| ||| |||||||| ||||||| ||||| ||| |||||||| Sbjct 2169 CCCTTAGCGTCCCATTGTCACCGCCATTGTAGCACGTGTGTAGCCCAGCCCGTAAGGGCC 2110 Query 120 ATGAGGACTTGACGTCATCCCCACCTTCCTC-CGGTTTGTCAC 161 ||||||||||||||||||||||||||||||| ||| || |||| Sbjct 2109 ATGAGGACTTGACGTCATCCCCACCTTCCTCGCGGCTTATCAC 2067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415729051010