Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20mauritaniensis_20[genbank_20GCA_5F000826465.1_202015- 01-07] 67,233 sequences; 106,836,370 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq42963 125 5e-27 >seq42963 Length=10355 Score = 125 bits (138), Expect = 5e-27 Identities = 111/139 (80%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 ||||||||||||||||||||||||||| |||| | ||||||||||||||||||| Sbjct 5778 TACCTTTTATCCGTTGAGCGATGGCCCATCCACGCGGGACCACCGGATCACTATGACCGA 5719 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120 |||||| ||||||| | ||||| ||||||| ||| ||| ||| ||||||| ||| Sbjct 5718 CTTTCGTCTCTGCTCGACTTGTTAGTCTCGCAGTCAGGCAGGCTTATGCCATTATACTCG 5659 Query 121 CACTACGATTTCCGACCGT 139 ||||||||||||||| Sbjct 5658 ACGAACGATTTCCGACCGT 5640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351778131100