Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20mauritaniensis_20[genbank_20GCA_5F000826465.1_202015- 01-07] 67,233 sequences; 106,836,370 total letters Query= AAMG01001946.1 Length=179 Score E Sequences producing significant alignments: (Bits) Value seq42963 123 2e-26 >seq42963 Length=10355 Score = 123 bits (136), Expect = 2e-26 Identities = 121/156 (78%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||||||||| |||| | | |||||||||||||||||||| |||||| ||| Sbjct 5766 GTTGAGCGATGGCCCATCCACGCGGGACCACCGGATCACTATGACCGACTTTCGTCTCTG 5707 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 ||||| || | ||||||||||| || |||||||||||| ||| | ||||| || Sbjct 5706 CTCGACTTGTTAGTCTCGCAGTCAGGCAGGCTTATGCCATTATACTCGACGAACGATTTC 5647 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 ||||||| | ||| ||| ||| | ||||||||| Sbjct 5646 CGACCGTTCTGAGCCTACCATCGCACGCCTCCGTTA 5611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 473291534996