Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20palestinensis_20[genbank_20GCA_5F000826325.1_202015- 01-07] 56,742 sequences; 103,482,825 total letters Query= AAMG01001674.1 Length=313 Score E Sequences producing significant alignments: (Bits) Value seq54178 77.0 6e-12 seq52950 73.4 7e-11 >seq54178 Length=25509 Score = 77.0 bits (84), Expect = 6e-12 Identities = 59/70 (84%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 107 TACAATCCGCCAAAGGTTGCAGGCAAGGACGATGTGACCGGCGAAGACCTGGTACAGCGC 166 ||||||||||| ||||| || ||||||||||| || ||||||||| ||| || || ||| Sbjct 2955 TACAATCCGCCCAAGGTGGCCGGCAAGGACGACGTCACCGGCGAACCCCTCGTCCAACGC 2896 Query 167 AAGGACGACa 176 ||||||||| Sbjct 2895 GAGGACGACA 2886 >seq52950 Length=2791 Score = 73.4 bits (80), Expect = 7e-11 Identities = 58/70 (83%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 107 TACAATCCGCCAAAGGTTGCAGGCAAGGACGATGTGACCGGCGAAGACCTGGTACAGCGC 166 ||||||||||| ||||| || ||||||||||| || ||||||||| ||| || || ||| Sbjct 345 TACAATCCGCCCAAGGTGGCCGGCAAGGACGACGTCACCGGCGAACCCCTCGTCCAACGC 404 Query 167 AAGGACGACa 176 | ||||||| Sbjct 405 GAAGACGACA 414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 898689775936