Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20palestinensis_20[genbank_20GCA_5F000826325.1_202015- 01-07] 56,742 sequences; 103,482,825 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq54303 77.0 5e-12 >seq54303 Length=793959 Score = 77.0 bits (84), Expect = 5e-12 Identities = 145/212 (68%), Gaps = 1/212 (0%) Strand=Plus/Minus Query 78 CTATCCAACCTGAGCACCGCAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCG 137 ||||||| | | || | |||| |||||| || | | || || || || ||||| | | Sbjct 621691 CTATCCACCTTCAGTGCGGCAATGAAGGCCTCCT-GCGGGATGTCGACCTTGCCGAACTG 621633 Query 138 CTTCATGCGTTTTTTACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTC 197 | ||| || || || |||| |||||||| || ||||||||||| || | | ||| Sbjct 621632 CCGCATCTTCTTCTTGCCTTCCTTCTGCTTCTCCAGAAGCTTGCGCTTGCGCGTGATGTC 621573 Query 198 ACCGCCGTAGCATTTGGCCAGTACGTTCTTTCTGAGAGCCTTGACGGAGGTCCGCGCAAT 257 ||||||||||| ||||| |||| ||| | || || || | ||||| || Sbjct 621572 GCCGCCGTAGCACTTGGCGGTGACGTCCTTGCGCAGCGCGCGCACCGTCTCGCGCGCGAT 621513 Query 258 GATCTGCCCGCCAATGGCGGCCTGGATCGCGA 289 | || ||||| || || |||||||||| || Sbjct 621512 CACCTTGCCGCCGATCGCCGCCTGGATCGGGA 621481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 837924275072