Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20palestinensis_20[genbank_20GCA_5F000826325.1_202015- 01-07] 56,742 sequences; 103,482,825 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq36966 401 2e-109 seq28440 401 2e-109 seq28439 401 2e-109 seq54446 370 3e-100 seq53723 370 3e-100 seq24741 370 3e-100 seq13867 116 9e-24 seq5147 102 2e-19 seq5146 102 2e-19 seq53056 87.8 4e-15 seq21053 87.8 4e-15 seq11065 87.8 4e-15 seq11064 87.8 4e-15 seq20151 86.0 2e-14 seq16367 86.0 2e-14 seq16148 86.0 2e-14 seq8337 78.8 2e-12 seq21869 77.0 8e-12 seq7401 77.0 8e-12 seq10760 73.4 1e-10 seq1907 73.4 1e-10 >seq36966 Length=1316 Score = 401 bits (444), Expect = 2e-109 Identities = 327/396 (83%), Gaps = 2/396 (1%) Strand=Plus/Minus Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72 ||||||||||||||| |||||||||||||||||||||||| |||||||||||||| || Sbjct 866 AAGCCCCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGGGCTAGCGTTGCTCG 807 Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132 |||| ||||||||||||||||||||||| || | ||||||||| ||||||| || | Sbjct 806 GAATCACTGGGCGTAAAGGGTGCGTAGGCGGGTCTTTAAGTCAGGGGTGAAATCCTGGAG 747 Query 133 CTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAAT 192 |||||| || | ||||| ||||| |||| | || |||| | |||| || ||||||| Sbjct 746 CTCAACTCCAGAACTGCCTTTGATACTGAGGATCTTGAGTTCGGGAGAGGTGAGTGGAAC 687 Query 193 TCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTT 252 | | ||||||| |||||||| |||||||||| | | ||||||||||||||||||||||| Sbjct 686 TGCGAGTGTAGAGGTGAAATTCGTAGATATTCGCAAGAACACCAGTGGCGAAGGCGGCTC 627 Query 253 GCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCC 312 |||| | | |||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct 626 ACTGGCCCGATACTGACGCTGAGGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCC 567 Query 313 TGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAAGTGCTCCGGTGC 372 ||||||||||||||||||||||||||| | || || || | || | | | ||| Sbjct 566 TGGTAGTCCACGCCGTAAACGATGAATGCCAGCCGTTGGAAAGTTTACTT--TTCAGTGG 509 Query 373 CGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 |||||| ||||| |||| ||||| ||||||||||| Sbjct 508 CGCAGCTAACGCTTTAAGCATTCCGCCTGGGGAGTA 473 >seq28440 Length=110124 Score = 401 bits (444), Expect = 2e-109 Identities = 327/396 (83%), Gaps = 2/396 (1%) Strand=Plus/Minus Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72 ||||||||||||||| |||||||||||||||||||||||| |||||||||||||| || Sbjct 442 AAGCCCCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGGGCTAGCGTTGCTCG 383 Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132 |||| ||||||||||||||||||||||| || | ||||||||| ||||||| || | Sbjct 382 GAATCACTGGGCGTAAAGGGTGCGTAGGCGGGTCTTTAAGTCAGGGGTGAAATCCTGGAG 323 Query 133 CTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAAT 192 |||||| || | ||||| ||||| |||| | || |||| | |||| || ||||||| Sbjct 322 CTCAACTCCAGAACTGCCTTTGATACTGAGGATCTTGAGTTCGGGAGAGGTGAGTGGAAC 263 Query 193 TCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTT 252 | | ||||||| |||||||| |||||||||| | | ||||||||||||||||||||||| Sbjct 262 TGCGAGTGTAGAGGTGAAATTCGTAGATATTCGCAAGAACACCAGTGGCGAAGGCGGCTC 203 Query 253 GCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCC 312 |||| | | |||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct 202 ACTGGCCCGATACTGACGCTGAGGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCC 143 Query 313 TGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAAGTGCTCCGGTGC 372 ||||||||||||||||||||||||||| | || || || | || | | | ||| Sbjct 142 TGGTAGTCCACGCCGTAAACGATGAATGCCAGCCGTTGGAAAGTTTACTT--TTCAGTGG 85 Query 373 CGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 |||||| ||||| |||| ||||| ||||||||||| Sbjct 84 CGCAGCTAACGCTTTAAGCATTCCGCCTGGGGAGTA 49 >seq28439 Length=70556 Score = 401 bits (444), Expect = 2e-109 Identities = 327/396 (83%), Gaps = 2/396 (1%) Strand=Plus/Minus Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72 ||||||||||||||| |||||||||||||||||||||||| |||||||||||||| || Sbjct 442 AAGCCCCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGGGCTAGCGTTGCTCG 383 Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132 |||| ||||||||||||||||||||||| || | ||||||||| ||||||| || | Sbjct 382 GAATCACTGGGCGTAAAGGGTGCGTAGGCGGGTCTTTAAGTCAGGGGTGAAATCCTGGAG 323 Query 133 CTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAAT 192 |||||| || | ||||| ||||| |||| | || |||| | |||| || ||||||| Sbjct 322 CTCAACTCCAGAACTGCCTTTGATACTGAGGATCTTGAGTTCGGGAGAGGTGAGTGGAAC 263 Query 193 TCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTT 252 | | ||||||| |||||||| |||||||||| | | ||||||||||||||||||||||| Sbjct 262 TGCGAGTGTAGAGGTGAAATTCGTAGATATTCGCAAGAACACCAGTGGCGAAGGCGGCTC 203 Query 253 GCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCC 312 |||| | | |||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct 202 ACTGGCCCGATACTGACGCTGAGGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCC 143 Query 313 TGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAAGTGCTCCGGTGC 372 ||||||||||||||||||||||||||| | || || || | || | | | ||| Sbjct 142 TGGTAGTCCACGCCGTAAACGATGAATGCCAGCCGTTGGAAAGTTTACTT--TTCAGTGG 85 Query 373 CGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 |||||| ||||| |||| ||||| ||||||||||| Sbjct 84 CGCAGCTAACGCTTTAAGCATTCCGCCTGGGGAGTA 49 >seq54446 Length=153271 Score = 370 bits (410), Expect = 3e-100 Identities = 328/410 (80%), Gaps = 10/410 (2%) Strand=Plus/Plus Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 60 ||| ||| || |||| |||||||||| |||||||||||||||||||||||| |||| || Sbjct 721 TACCTGACGAATAAGCTCCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGAGC 780 Query 61 TAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGT 120 ||||||| | |||||||||||||||||||||| ||||||| || | ||||| ||| || Sbjct 781 TAGCGTTGTTCGGAATTACTGGGCGTAAAGGGCGCGTAGGCGGCCTTGTAAGTTAGATGT 840 Query 121 GAAAGGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGG 180 ||||| | |||| |||| || ||||| ||| | |||||| ||| ||| | ||| Sbjct 841 GAAAGCCCCGGGCTTAACCTGGGAACTGCATTTAAGACTGCAAAGCTTGAGGACGAGAGA 900 Query 181 GGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGG 240 || |||||||||| ||||||| |||||||| |||||||||| | |||||||||||| Sbjct 901 GGAAAGTGGAATTGTGAGTGTAGAGGTGAAATTCGTAGATATTCACAAGAACACCAGTGG 960 Query 241 CGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAG 300 |||||||| ||| |||| ||| ||||| || |||| |||||||||||||||||||||| Sbjct 961 CGAAGGCGACTTTCTGGCTCGTATCTGACGCTAAGGCGCGAAAGCGTGGGGAGCAAACAG 1020 Query 301 GATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGG--GGCGCAT 358 ||||||||||||||||||||||||| ||||||||||| | |||| ||| || || || Sbjct 1021 GATTAGATACCCTGGTAGTCCACGCTGTAAACGATGAGTGCTAGATGTTGGTCTTCGGAT 1080 Query 359 AAGTGCTCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 | || |||||| |||||| |||| | ||| ||||||||||| Sbjct 1081 --------CAGTATCGCAGCTAACGCATTAAGCACTCCGCCTGGGGAGTA 1122 >seq53723 Length=82647 Score = 370 bits (410), Expect = 3e-100 Identities = 328/410 (80%), Gaps = 10/410 (2%) Strand=Plus/Minus Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 60 ||| ||| || |||| |||||||||| |||||||||||||||||||||||| |||| || Sbjct 450 TACCTGACGAATAAGCTCCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGAGC 391 Query 61 TAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGT 120 ||||||| | |||||||||||||||||||||| ||||||| || | ||||| ||| || Sbjct 390 TAGCGTTGTTCGGAATTACTGGGCGTAAAGGGCGCGTAGGCGGCCTTGTAAGTTAGATGT 331 Query 121 GAAAGGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGG 180 ||||| | |||| |||| || ||||| ||| | |||||| ||| ||| | ||| Sbjct 330 GAAAGCCCCGGGCTTAACCTGGGAACTGCATTTAAGACTGCAAAGCTTGAGGACGAGAGA 271 Query 181 GGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGG 240 || |||||||||| ||||||| |||||||| |||||||||| | |||||||||||| Sbjct 270 GGAAAGTGGAATTGTGAGTGTAGAGGTGAAATTCGTAGATATTCACAAGAACACCAGTGG 211 Query 241 CGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAG 300 |||||||| ||| |||| ||| ||||| || |||| |||||||||||||||||||||| Sbjct 210 CGAAGGCGACTTTCTGGCTCGTATCTGACGCTAAGGCGCGAAAGCGTGGGGAGCAAACAG 151 Query 301 GATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGG--GGCGCAT 358 ||||||||||||||||||||||||| ||||||||||| | |||| ||| || || || Sbjct 150 GATTAGATACCCTGGTAGTCCACGCTGTAAACGATGAGTGCTAGATGTTGGTCTTCGGAT 91 Query 359 AAGTGCTCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 | || |||||| |||||| |||| | ||| ||||||||||| Sbjct 90 --------CAGTATCGCAGCTAACGCATTAAGCACTCCGCCTGGGGAGTA 49 >seq24741 Length=27080 Score = 370 bits (410), Expect = 3e-100 Identities = 328/410 (80%), Gaps = 10/410 (2%) Strand=Plus/Minus Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 60 ||| ||| || |||| |||||||||| |||||||||||||||||||||||| |||| || Sbjct 450 TACCTGACGAATAAGCTCCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGAGC 391 Query 61 TAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGT 120 ||||||| | |||||||||||||||||||||| ||||||| || | ||||| ||| || Sbjct 390 TAGCGTTGTTCGGAATTACTGGGCGTAAAGGGCGCGTAGGCGGCCTTGTAAGTTAGATGT 331 Query 121 GAAAGGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGG 180 ||||| | |||| |||| || ||||| ||| | |||||| ||| ||| | ||| Sbjct 330 GAAAGCCCCGGGCTTAACCTGGGAACTGCATTTAAGACTGCAAAGCTTGAGGACGAGAGA 271 Query 181 GGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGG 240 || |||||||||| ||||||| |||||||| |||||||||| | |||||||||||| Sbjct 270 GGAAAGTGGAATTGTGAGTGTAGAGGTGAAATTCGTAGATATTCACAAGAACACCAGTGG 211 Query 241 CGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAG 300 |||||||| ||| |||| ||| ||||| || |||| |||||||||||||||||||||| Sbjct 210 CGAAGGCGACTTTCTGGCTCGTATCTGACGCTAAGGCGCGAAAGCGTGGGGAGCAAACAG 151 Query 301 GATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGG--GGCGCAT 358 ||||||||||||||||||||||||| ||||||||||| | |||| ||| || || || Sbjct 150 GATTAGATACCCTGGTAGTCCACGCTGTAAACGATGAGTGCTAGATGTTGGTCTTCGGAT 91 Query 359 AAGTGCTCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 | || |||||| |||||| |||| | ||| ||||||||||| Sbjct 90 --------CAGTATCGCAGCTAACGCATTAAGCACTCCGCCTGGGGAGTA 49 >seq13867 Length=127 Score = 116 bits (128), Expect = 9e-24 Identities = 81/92 (88%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 22 CTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTG 81 |||||| ||||||||||| |||||||||||| || ||||||| ||||| || | | |||| Sbjct 2 CTAACTTCGTGCCAGCAGTCGCGGTAATACGGAGAGGGCTAGTGTTATTCGCATTGACTG 61 Query 82 GGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGT 113 || |||||||||||||||||||||| |||||| Sbjct 62 GGGGTAAAGGGTGCGTAGGTGGTTTGTTAAGT 93 >seq5147 Length=127 Score = 102 bits (112), Expect = 2e-19 Identities = 73/84 (87%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 30 GTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGCGTAAA 89 |||||||||| |||||||||||| || ||||||| ||||| || | | |||||| ||||| Sbjct 1 GTGCCAGCAGTCGCGGTAATACGGAGAGGGCTAGTGTTATTCGCATTGACTGGGTGTAAA 60 Query 90 GGGTGCGTAGGTGGTTTCTTAAGT 113 ||| ||||||||||||| |||||| Sbjct 61 GGGGGCGTAGGTGGTTTGTTAAGT 84 >seq5146 Length=127 Score = 102 bits (112), Expect = 2e-19 Identities = 73/84 (87%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 30 GTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGCGTAAA 89 |||||||||| |||||||||||| || ||||||| ||||| || | | |||||| ||||| Sbjct 1 GTGCCAGCAGTCGCGGTAATACGGAGAGGGCTAGTGTTATTCGCATTGACTGGGTGTAAA 60 Query 90 GGGTGCGTAGGTGGTTTCTTAAGT 113 ||| ||||||||||||| |||||| Sbjct 61 GGGCGCGTAGGTGGTTTGTTAAGT 84 >seq53056 Length=2280 Score = 87.8 bits (96), Expect = 4e-15 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 60 ||||||| | ||||||| | |||||| ||||||||||| |||||||||||| || |||| Sbjct 1139 TACTTGAAGGAGAAGCCCTGACTAACTTCGTGCCAGCAGTCGCGGTAATACGGAGAGGGC 1080 Query 61 TAGCGTTATCCGGAATTACTGGG 83 ||| ||||| || | | |||||| Sbjct 1079 TAGTGTTATTCGCATTGACTGGG 1057 >seq21053 Length=127 Score = 87.8 bits (96), Expect = 4e-15 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 41 CGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGG 100 |||||||||||| || ||||||| ||||| || | | |||||| |||||||||||||||| Sbjct 3 CGCGGTAATACGGAGAGGGCTAGTGTTATTCGCATTGACTGGGTGTAAAGGGTGCGTAGG 62 Query 101 TGGTTTCTTAAGT 113 | |||| |||||| Sbjct 63 TTGTTTGTTAAGT 75 >seq11065 Length=127 Score = 87.8 bits (96), Expect = 4e-15 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 38 AGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGT 97 || |||||||||||| || ||||||| ||||| || | | |||||| ||||||||||||| Sbjct 1 AGTCGCGGTAATACGGAGAGGGCTAGTGTTATTCGCATTGACTGGGTGTAAAGGGTGCGT 60 Query 98 AGGTGGTTTCTTAAGT 113 ||| ||||| |||||| Sbjct 61 AGGGGGTTTGTTAAGT 76 >seq11064 Length=127 Score = 87.8 bits (96), Expect = 4e-15 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 38 AGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGT 97 || |||||||||||| || ||||||| ||||| || | | |||||| ||||||||||||| Sbjct 1 AGTCGCGGTAATACGGAGAGGGCTAGTGTTATTCGCATTGACTGGGTGTAAAGGGTGCGT 60 Query 98 AGGTGGTTTCTTAAGT 113 ||| ||||| |||||| Sbjct 61 AGGCGGTTTGTTAAGT 76 >seq20151 Length=127 Score = 86.0 bits (94), Expect = 2e-14 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 264 ACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCAC 323 |||||||||||||| | ||||| | |||| |||||||||||||| ||||||||||| | Sbjct 109 ACTGACACTGAGGCACAAAAGCATAGGGATCAAACAGGATTAGAGGCCCTGGTAGTCTAT 50 Query 324 GCCGTAAACGATGAATA 340 ||| | | ||||||||| Sbjct 49 GCCCTGACCGATGAATA 33 >seq16367 Length=127 Score = 86.0 bits (94), Expect = 2e-14 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 264 ACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCAC 323 |||||||||||||| | ||||| | |||| |||||||||||||| ||||||||||| | Sbjct 109 ACTGACACTGAGGCACAAAAGCATAGGGATCAAACAGGATTAGAGTCCCTGGTAGTCTAT 50 Query 324 GCCGTAAACGATGAATA 340 ||| | | ||||||||| Sbjct 49 GCCCTGACCGATGAATA 33 >seq16148 Length=127 Score = 86.0 bits (94), Expect = 2e-14 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 264 ACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCAC 323 |||||||||||||| | ||||| | |||| |||||||||||||| ||||||||||| | Sbjct 109 ACTGACACTGAGGCACAAAAGCATAGGGATCAAACAGGATTAGAGCCCCTGGTAGTCTAT 50 Query 324 GCCGTAAACGATGAATA 340 ||| | | ||||||||| Sbjct 49 GCCCTGACCGATGAATA 33 >seq8337 Length=88 Score = 78.8 bits (86), Expect = 2e-12 Identities = 55/63 (87%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 264 ACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCAC 323 |||||||||||||| | ||||| | |||| |||||||||||||| |||||||||||| | Sbjct 19 ACTGACACTGAGGCACAAAAGCATAGGGATCAAACAGGATTAGAGACCCTGGTAGTCTAT 78 Query 324 GCC 326 ||| Sbjct 79 GCC 81 >seq21869 Length=127 Score = 77.0 bits (84), Expect = 8e-12 Identities = 72/90 (80%), Gaps = 4/90 (4%) Strand=Plus/Plus Query 239 GGCGAAGGCGGCTTGCTGGACTGTAA--CTGACACTGAGGCTCGAAAGCGTGGGGAGCAA 296 ||||||||| ||| || | | ||| ||||| ||||||| | ||||| | |||| ||| Sbjct 33 GGCGAAGGCTGCTATCT--ATTTTAATACTGACGCTGAGGCACAAAAGCATAGGGATCAA 90 Query 297 ACAGGATTAGATACCCTGGTAGTCCACGCC 326 ||||||||||| |||||||||||| | ||| Sbjct 91 ACAGGATTAGAGACCCTGGTAGTCTATGCC 120 >seq7401 Length=87 Score = 77.0 bits (84), Expect = 8e-12 Identities = 59/70 (84%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 271 CTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAA 330 ||||||| | ||||| | |||| |||||||||||||| |||||||||||| | ||| | | Sbjct 87 CTGAGGCACAAAAGCATAGGGATCAAACAGGATTAGAGACCCTGGTAGTCTATGCCCTGA 28 Query 331 ACGATGAATA 340 ||||||||| Sbjct 27 CCGATGAATA 18 >seq10760 Length=127 Score = 73.4 bits (80), Expect = 1e-10 Identities = 52/60 (87%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 54 AGGGGGCTAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGT 113 || ||||||| ||||| || | | |||||| |||||||||||||||||||||| |||||| Sbjct 127 AGAGGGCTAGTGTTATTCGCATTGACTGGGTGTAAAGGGTGCGTAGGTGGTTTGTTAAGT 68 >seq1907 Length=94 Score = 73.4 bits (80), Expect = 1e-10 Identities = 52/60 (87%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 54 AGGGGGCTAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGT 113 || ||||||| ||||| || | | |||||| |||||||||||||||||||||| |||||| Sbjct 94 AGAGGGCTAGTGTTATTCGCATTGACTGGGTGTAAAGGGTGCGTAGGTGGTTTGTTAAGT 35 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1202517280256