Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20palestinensis_20[genbank_20GCA_5F000826325.1_202015- 01-07] 56,742 sequences; 103,482,825 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq53477 104 4e-20 seq39160 73.4 6e-11 >seq53477 Length=5923 Score = 104 bits (114), Expect = 4e-20 Identities = 97/121 (80%), Gaps = 2/121 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | || |||||| |||||||| ||| | || | || | |||| Sbjct 3743 GTACGAGAGGAACAGTCGA-TTCAGA-TAATTGGTATTTTCCCTTGGCCGAAAGGCCAGT 3686 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | | |||||||||||||| |||||||||||||||||||||||| |||||||| ||| | Sbjct 3685 GGGGAGAAGCTACCATCTGTAGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 3626 Query 121 G 121 | Sbjct 3625 G 3625 >seq39160 Length=6056 Score = 73.4 bits (80), Expect = 6e-11 Identities = 48/53 (91%), Gaps = 0/53 (0%) Strand=Plus/Minus Query 66 GAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 |||||||||||||| |||||||||||||||||||||||| |||||| | ||| Sbjct 1445 GAAGCTACCATCTGTAGGATTATGGCTGAACGCCTCTAAGCCAGAATGCGTGC 1393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 818749695488