Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20pearcei_20[genbank_20GCA_5F000826505.1_202015-01-07] 224,137 sequences; 115,614,128 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq123957 82.4 7e-14 seq156804 73.4 4e-11 seq8609 73.4 4e-11 >seq123957 Length=127 Score = 82.4 bits (90), Expect = 7e-14 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||| ||||||||||| ||||||| || |||| || ||||||||| ||| Sbjct 102 GCGACTGTTTACTAAAAACACAGGACTCTGCTAAGTTGAAAAACGATGTATAGGGTCTGA 43 Query 128 CGCCTGCCCGGTGCCGGAAG 147 | |||||||||||| | ||| Sbjct 42 CACCTGCCCGGTGCTGAAAG 23 >seq156804 Length=127 Score = 73.4 bits (80), Expect = 4e-11 Identities = 64/80 (80%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||| ||||||||||| |||| || || | || || ||||||||| ||| Sbjct 92 GCGACTGTTTACTAAAAACACAGGACTCCGCTAAGTTGTAAAACGATGTATAGGGTCTGA 33 Query 128 CGCCTGCCCGGTGCCGGAAG 147 | |||||||||||| | ||| Sbjct 32 CACCTGCCCGGTGCTGAAAG 13 >seq8609 Length=125 Score = 73.4 bits (80), Expect = 4e-11 Identities = 65/80 (81%), Gaps = 1/80 (1%) Strand=Plus/Minus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||| ||||||||||| ||||||| || | || || ||||||||| ||| Sbjct 85 GCGACTGTTTACTAAAAACACAG-ACTCTGCTAAGTTGTAAAACGATGTATAGGGTCTGA 27 Query 128 CGCCTGCCCGGTGCCGGAAG 147 | |||||||||||| | ||| Sbjct 26 CACCTGCCCGGTGCTGAAAG 7 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475764711197