Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20pearcei_20[genbank_20GCA_5F000826505.1_202015-01-07] 224,137 sequences; 115,614,128 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq119719 127 5e-27 seq83059 127 5e-27 seq30243 127 5e-27 seq165067 116 9e-24 seq113629 116 9e-24 seq14236 116 9e-24 seq156710 113 1e-22 seq62752 109 1e-21 seq18483 109 1e-21 seq106789 98.7 2e-18 seq89286 98.7 2e-18 seq22681 98.7 2e-18 seq117228 89.7 1e-15 seq16113 89.7 1e-15 seq30242 87.8 5e-15 seq67862 84.2 6e-14 seq123957 82.4 2e-13 seq156804 73.4 1e-10 seq34323 73.4 1e-10 seq8609 73.4 1e-10 >seq119719 Length=127 Score = 127 bits (140), Expect = 5e-27 Identities = 79/85 (93%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||||| |||||| |||||||||||||| ||| |||||||||||||||||||||||||| Sbjct 31 TCGTTACACCATTCATGCAGGTCGGAACTCACCAGACAAGGAATTTCGCTACCTTAGGAC 90 Query 128 CGTTATTGTTACGGCCGCCGTTTAC 152 |||||| ||||| |||||||||||| Sbjct 91 CGTTATGGTTACAGCCGCCGTTTAC 115 >seq83059 Length=127 Score = 127 bits (140), Expect = 5e-27 Identities = 79/85 (93%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||||| |||||| |||||||||||||| ||||||||| |||||||||||||||||||| Sbjct 25 TCGTTACACCATTCATGCAGGTCGGAACTCACCCGACAATGAATTTCGCTACCTTAGGAC 84 Query 128 CGTTATTGTTACGGCCGCCGTTTAC 152 |||||| ||||| |||||||||||| Sbjct 85 CGTTATGGTTACAGCCGCCGTTTAC 109 >seq30243 Length=127 Score = 127 bits (140), Expect = 5e-27 Identities = 79/85 (93%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||||| |||||| |||||||||||||| |||||||||||||||||||| ||||||||| Sbjct 14 TCGTTACACCATTCATGCAGGTCGGAACTCACCCGACAAGGAATTTCGCTTCCTTAGGAC 73 Query 128 CGTTATTGTTACGGCCGCCGTTTAC 152 |||||| ||||| |||||||||||| Sbjct 74 CGTTATGGTTACAGCCGCCGTTTAC 98 >seq165067 Length=88 Score = 116 bits (128), Expect = 9e-24 Identities = 72/77 (94%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 76 CCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATTG 135 |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| | Sbjct 86 CCATTCATGCAGGTCGGAACTCTCCCGACAAGGAATTTCGCTACCTTAGGACCGTTATGG 27 Query 136 TTACGGCCGCCGTTTAC 152 |||| |||||||||||| Sbjct 26 TTACAGCCGCCGTTTAC 10 >seq113629 Length=127 Score = 116 bits (128), Expect = 9e-24 Identities = 100/121 (83%), Gaps = 2/121 (2%) Strand=Plus/Plus Query 6 ATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGG-TGGAGACAGCGCCG 64 ||| |||||||||||||||| | || ||||||||| || || ||||||||| | Sbjct 8 ATATACTGCATCTTCACAGCAAGTTTAATTTCACT-AGGCTAATACTGGAGACAGTATGG 66 Query 65 CCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAG 124 ||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct 67 AAGTCGTTACACCATTCATGCAGGTCGGAACTCACCCGACAAGGAATTTCGCTACCTTAG 126 Query 125 G 125 | Sbjct 127 G 127 >seq14236 Length=127 Score = 116 bits (128), Expect = 9e-24 Identities = 72/77 (94%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 76 CCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATTG 135 |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| | Sbjct 2 CCATTCATGCAGGTCGGAACTCACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATGG 61 Query 136 TTACGGCCGCCGTTTAC 152 || | |||||||||||| Sbjct 62 TTTCAGCCGCCGTTTAC 78 >seq156710 Length=127 Score = 113 bits (124), Expect = 1e-22 Identities = 98/119 (82%), Gaps = 2/119 (2%) Strand=Plus/Plus Query 6 ATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGG-TGGAGACAGCGCCG 64 ||| |||||||||||||||| | || ||||||||| || || ||||||||| | Sbjct 10 ATATACTGCATCTTCACAGCAAGTTTAATTTCACT-AGGCTAATACTGGAGACAGAAGGG 68 Query 65 CCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTA 123 ||||||| |||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct 69 AAGTCGTTACACCATTCATGCAGGTCGGAACTCACCCGACAAGGAATTTCGCTACCTTA 127 >seq62752 Length=71 Score = 109 bits (120), Expect = 1e-21 Identities = 66/70 (94%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||||| |||||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct 2 TCGTTACACCATTCATGCAGGTCGGAACTCACCCGACAAGGAATTTCGCTACCTTAGGAC 61 Query 128 CGTTATTGTT 137 |||||| ||| Sbjct 62 CGTTATGGTT 71 >seq18483 Length=127 Score = 109 bits (120), Expect = 1e-21 Identities = 68/73 (93%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 80 TCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTAC 139 || |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| Sbjct 127 TCATGCAGGTCGGAACTCACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATGGTTAC 68 Query 140 GGCCGCCGTTTAC 152 || ||||||||| Sbjct 67 AGCAGCCGTTTAC 55 >seq106789 Length=64 Score = 98.7 bits (108), Expect = 2e-18 Identities = 59/62 (95%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||||| |||||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct 62 TCGTTACACCATTCATGCAGGTCGGAACTCACCCGACAAGGAATTTCGCTACCTTAGGAC 3 Query 128 CG 129 || Sbjct 2 CG 1 >seq89286 Length=64 Score = 98.7 bits (108), Expect = 2e-18 Identities = 59/62 (95%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||||| |||||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct 2 TCGTTACACCATTCATGCAGGTCGGAACTCACCCGACAAGGAATTTCGCTACCTTAGGAC 61 Query 128 CG 129 || Sbjct 62 CG 63 >seq22681 Length=67 Score = 98.7 bits (108), Expect = 2e-18 Identities = 59/62 (95%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||||| |||||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct 6 TCGTTACACCATTCATGCAGGTCGGAACTCACCCGACAAGGAATTTCGCTACCTTAGGAC 65 Query 128 CG 129 || Sbjct 66 CG 67 >seq117228 Length=76 Score = 89.7 bits (98), Expect = 1e-15 Identities = 52/54 (96%), Gaps = 0/54 (0%) Strand=Plus/Plus Query 99 CCCGACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTACGGCCGCCGTTTAC 152 ||||||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct 1 CCCGACAAGGAATTTCGCTACCTTAGGACCGTTATGGTTACAGCCGCCGTTTAC 54 >seq16113 Length=66 Score = 89.7 bits (98), Expect = 1e-15 Identities = 52/54 (96%), Gaps = 0/54 (0%) Strand=Plus/Plus Query 99 CCCGACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTACGGCCGCCGTTTAC 152 ||||||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct 1 CCCGACAAGGAATTTCGCTACCTTAGGACCGTTATGGTTACAGCCGCCGTTTAC 54 >seq30242 Length=69 Score = 87.8 bits (96), Expect = 5e-15 Identities = 53/56 (95%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTA 123 ||||||| |||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct 14 TCGTTACACCATTCATGCAGGTCGGAACTCACCCGACAAGGAATTTCGCTACCTTA 69 >seq67862 Length=75 Score = 84.2 bits (92), Expect = 6e-14 Identities = 49/51 (96%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 102 GACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTACGGCCGCCGTTTAC 152 |||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct 1 GACAAGGAATTTCGCTACCTTAGGACCGTTATGGTTACAGCCGCCGTTTAC 51 >seq123957 Length=127 Score = 82.4 bits (90), Expect = 2e-13 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 200 CTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAGTGCTG 259 ||| | |||||||||||| |||| ||||||||| || |||| || ||||||| ||| Sbjct 23 CTTTCAGCACCGGGCAGGTGTCAGACCCTATACATCGTTTTTCAACTTAGCAGAGTCCTG 82 Query 260 TGTTTTTAATAAACAGTCGC 279 |||||||| ||||||||||| Sbjct 83 TGTTTTTAGTAAACAGTCGC 102 >seq156804 Length=127 Score = 73.4 bits (80), Expect = 1e-10 Identities = 64/80 (80%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 200 CTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAGTGCTG 259 ||| | |||||||||||| |||| ||||||||| || || | || || |||| ||| Sbjct 13 CTTTCAGCACCGGGCAGGTGTCAGACCCTATACATCGTTTTACAACTTAGCGGAGTCCTG 72 Query 260 TGTTTTTAATAAACAGTCGC 279 |||||||| ||||||||||| Sbjct 73 TGTTTTTAGTAAACAGTCGC 92 >seq34323 Length=70 Score = 73.4 bits (80), Expect = 1e-10 Identities = 43/45 (96%), Gaps = 0/45 (0%) Strand=Plus/Plus Query 108 GAATTTCGCTACCTTAGGACCGTTATTGTTACGGCCGCCGTTTAC 152 |||||||||||||||||||||||||| ||||| |||||||||||| Sbjct 1 GAATTTCGCTACCTTAGGACCGTTATGGTTACAGCCGCCGTTTAC 45 >seq8609 Length=125 Score = 73.4 bits (80), Expect = 1e-10 Identities = 65/80 (81%), Gaps = 1/80 (1%) Strand=Plus/Plus Query 200 CTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAGTGCTG 259 ||| | |||||||||||| |||| ||||||||| || || | || ||||||| ||| Sbjct 7 CTTTCAGCACCGGGCAGGTGTCAGACCCTATACATCGTTTTACAACTTAGCAGAGT-CTG 65 Query 260 TGTTTTTAATAAACAGTCGC 279 |||||||| ||||||||||| Sbjct 66 TGTTTTTAGTAAACAGTCGC 85 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1257974080704