Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20pearcei_20[genbank_20GCA_5F000826505.1_202015-01-07] 224,137 sequences; 115,614,128 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq211269 205 1e-50 seq45294 104 4e-20 seq212700 93.3 7e-17 >seq211269 Length=2841 Score = 205 bits (226), Expect = 1e-50 Identities = 115/116 (99%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 143 TATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAA 202 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1043 TATTTAGCAGGTTAAGGTCTCGTTCGTTAACGGAATTAACCAGACAAATCACTCCACCAA 1102 Query 203 CTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1103 CTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 1158 Score = 147 bits (162), Expect = 3e-33 Identities = 103/116 (89%), Gaps = 1/116 (1%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 796 ACTCGTTGGATTAATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 855 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGC-CAATAGTCCCTCTAAGAAGC 116 |||||||||||||||||||||| ||||| | || || |||||||||||||||| Sbjct 856 CCTGTTATTGCCTCAAACTTCCGCTGGCTAGGCGCGCAGCAGTCCCTCTAAGAAGC 911 >seq45294 Length=125 Score = 104 bits (114), Expect = 4e-20 Identities = 59/60 (98%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 143 TATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAA 202 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 4 TATTTAGCAGGTTAAGGTCTCGTTCGTTAACGGAATTAACCAGACAAATCACTCCACCAA 63 >seq212700 Length=32774 Score = 93.3 bits (102), Expect = 7e-17 Identities = 68/78 (87%), Gaps = 1/78 (1%) Strand=Plus/Plus Query 40 GAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGC-CA 98 ||||||||||||||||| |||||||||||||||||||||||||| ||||| | ||| | Sbjct 1034 GAACATCTAAGGGCATCCCAGACCTGTTATTGCCTCAAACTTCCGCTGGCTAGGAGCGTA 1093 Query 99 ATAGTCCCTCTAAGAAGC 116 ||||||||||| |||| Sbjct 1094 GCAGTCCCTCTAATAAGC 1111 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795069886497