Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20pearcei_20[genbank_20GCA_5F000826505.1_202015-01-07] 224,137 sequences; 115,614,128 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq62752 102 9e-20 seq119719 96.9 4e-18 seq106789 96.9 4e-18 seq89286 96.9 4e-18 seq83059 96.9 4e-18 seq30243 96.9 4e-18 seq22681 96.9 4e-18 seq14236 96.9 4e-18 seq165067 93.3 5e-17 seq113629 93.3 5e-17 seq156710 89.7 6e-16 seq18483 87.8 2e-15 seq30242 86.0 7e-15 >seq62752 Length=71 Score = 102 bits (112), Expect = 9e-20 Identities = 59/61 (97%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 6 TACACCATTCATGCAGGTCGGAACTCACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 65 Query 173 A 173 | Sbjct 66 A 66 >seq119719 Length=127 Score = 96.9 bits (106), Expect = 4e-18 Identities = 58/61 (95%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 |||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct 35 TACACCATTCATGCAGGTCGGAACTCACCAGACAAGGAATTTCGCTACCTTAGGACCGTT 94 Query 173 A 173 | Sbjct 95 A 95 >seq106789 Length=64 Score = 96.9 bits (106), Expect = 4e-18 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCG 170 |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 58 TACACCATTCATGCAGGTCGGAACTCACCCGACAAGGAATTTCGCTACCTTAGGACCG 1 >seq89286 Length=64 Score = 96.9 bits (106), Expect = 4e-18 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCG 170 |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 6 TACACCATTCATGCAGGTCGGAACTCACCCGACAAGGAATTTCGCTACCTTAGGACCG 63 >seq83059 Length=127 Score = 96.9 bits (106), Expect = 4e-18 Identities = 58/61 (95%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 |||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||||| Sbjct 29 TACACCATTCATGCAGGTCGGAACTCACCCGACAATGAATTTCGCTACCTTAGGACCGTT 88 Query 173 A 173 | Sbjct 89 A 89 >seq30243 Length=127 Score = 96.9 bits (106), Expect = 4e-18 Identities = 58/61 (95%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 |||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct 18 TACACCATTCATGCAGGTCGGAACTCACCCGACAAGGAATTTCGCTTCCTTAGGACCGTT 77 Query 173 A 173 | Sbjct 78 A 78 >seq22681 Length=67 Score = 96.9 bits (106), Expect = 4e-18 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCG 170 |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 10 TACACCATTCATGCAGGTCGGAACTCACCCGACAAGGAATTTCGCTACCTTAGGACCG 67 >seq14236 Length=127 Score = 96.9 bits (106), Expect = 4e-18 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 116 ACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1 ACCATTCATGCAGGTCGGAACTCACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 58 >seq165067 Length=88 Score = 93.3 bits (102), Expect = 5e-17 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 115 CACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 88 CACCATTCATGCAGGTCGGAACTCTCCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 30 >seq113629 Length=127 Score = 93.3 bits (102), Expect = 5e-17 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 54 GCATCTTCACCGATACTACAATTTCACTGAGCTCACGGTTGAGACAGNNNNNNNNNNNNT 113 |||||||||| | | | ||||||||| ||| | | ||||||| | Sbjct 15 GCATCTTCACAGCAAGTTTAATTTCACTAGGCTAATACTGGAGACAGTATGGAAGTCGTT 74 Query 114 ACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGG 166 ||||||||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct 75 ACACCATTCATGCAGGTCGGAACTCACCCGACAAGGAATTTCGCTACCTTAGG 127 >seq156710 Length=127 Score = 89.7 bits (98), Expect = 6e-16 Identities = 84/111 (76%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 54 GCATCTTCACCGATACTACAATTTCACTGAGCTCACGGTTGAGACAGNNNNNNNNNNNNT 113 |||||||||| | | | ||||||||| ||| | | ||||||| | Sbjct 17 GCATCTTCACAGCAAGTTTAATTTCACTAGGCTAATACTGGAGACAGAAGGGAAGTCGTT 76 Query 114 ACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTA 164 ||||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct 77 ACACCATTCATGCAGGTCGGAACTCACCCGACAAGGAATTTCGCTACCTTA 127 >seq18483 Length=127 Score = 87.8 bits (96), Expect = 2e-15 Identities = 51/53 (96%), Gaps = 0/53 (0%) Strand=Plus/Minus Query 121 TCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173 || |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 127 TCATGCAGGTCGGAACTCACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 75 >seq30242 Length=69 Score = 86.0 bits (94), Expect = 7e-15 Identities = 50/52 (96%), Gaps = 0/52 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTA 164 |||||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct 18 TACACCATTCATGCAGGTCGGAACTCACCCGACAAGGAATTTCGCTACCTTA 69 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546011849763