Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20pearcei_20[genbank_20GCA_5F000826505.1_202015-01-07] 224,137 sequences; 115,614,128 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq215010 75.2 2e-11 seq203315 75.2 2e-11 seq203314 75.2 2e-11 >seq215010 Length=2382 Score = 75.2 bits (82), Expect = 2e-11 Identities = 65/81 (80%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 158 CCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTTGGCCA 217 |||| |||||||| |||||||| ||||| ||| | | ||| ||||||||||| |||||| Sbjct 191 CCTTCTGCTTCTCGAGCAGCTTTCGCTTCCGGGTGATGTCGCCGCCGTAGCACTTGGCCG 250 Query 218 GTACGTTCTTTCTGAGAGCCT 238 |||| ||||| || |||| Sbjct 251 TCACGTCCTTTCGCAGCGCCT 271 Score = 75.2 bits (82), Expect = 2e-11 Identities = 65/81 (80%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 158 CCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTTGGCCA 217 |||| |||||||| |||||||| ||||| ||| | | ||| ||||||||||| |||||| Sbjct 774 CCTTCTGCTTCTCGAGCAGCTTTCGCTTCCGGGTGATGTCGCCGCCGTAGCACTTGGCCG 833 Query 218 GTACGTTCTTTCTGAGAGCCT 238 |||| ||||| || |||| Sbjct 834 TCACGTCCTTTCGCAGCGCCT 854 >seq203315 Length=972 Score = 75.2 bits (82), Expect = 2e-11 Identities = 65/81 (80%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 158 CCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTTGGCCA 217 |||| |||||||| |||||||| ||||| ||| | | ||| ||||||||||| |||||| Sbjct 115 CCTTCTGCTTCTCGAGCAGCTTTCGCTTCCGGGTGATGTCGCCGCCGTAGCACTTGGCCG 56 Query 218 GTACGTTCTTTCTGAGAGCCT 238 |||| ||||| || |||| Sbjct 55 TCACGTCCTTTCGCAGCGCCT 35 >seq203314 Length=942 Score = 75.2 bits (82), Expect = 2e-11 Identities = 65/81 (80%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 158 CCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTTGGCCA 217 |||| |||||||| |||||||| ||||| ||| | | ||| ||||||||||| |||||| Sbjct 115 CCTTCTGCTTCTCGAGCAGCTTTCGCTTCCGGGTGATGTCGCCGCCGTAGCACTTGGCCG 56 Query 218 GTACGTTCTTTCTGAGAGCCT 238 |||| ||||| || |||| Sbjct 55 TCACGTCCTTTCGCAGCGCCT 35 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 839772611039