Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20pearcei_20[genbank_20GCA_5F000826505.1_202015-01-07] 224,137 sequences; 115,614,128 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq62913 100 7e-19 >seq62913 Length=124 Score = 100 bits (110), Expect = 7e-19 Identities = 94/117 (80%), Gaps = 2/117 (2%) Strand=Plus/Plus Query 47 ATCAGGCTTGCGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACC 106 |||| |||| |||||||||| ||||||| ||||||||||| | ||| || || | || Sbjct 7 ATCAAGCTTTCGCCCATTGTCAAATATTCTCCACTGCTGCC-CTTTTAGAAGACTTGGCC 65 Query 107 GTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCT 163 || | ||||| ||| |||||||| |||| |||||| |||||||| | ||||||| || Sbjct 66 GT-TTTCAGTCCCAATGTGGCTGATCATTCTCTCAAACCAGCTAAGCATCGTCGGCT 121 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1219660149312