Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20pearcei_20[genbank_20GCA_5F000826505.1_202015-01-07] 224,137 sequences; 115,614,128 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq156254 86.0 2e-14 seq37892 86.0 2e-14 seq125428 78.8 3e-12 >seq156254 Length=127 Score = 86.0 bits (94), Expect = 2e-14 Identities = 88/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 89 CTGGAGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAA 148 ||| ||| |||||||| |||||| | ||| |||||||| || | |||||| ||| Sbjct 8 CTGAAGGATCGAACCCATGTATGTTGCATAATACCGGGATGAGTGGTAGCTAGGGGGGAA 67 Query 149 AGGCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGC 203 ||||||| ||| ||| | ||||| || |||| ||||| |||||||||||| || Sbjct 68 AGGCTAATCAAGCTTAGTGTTAGCTAGTACTCTACGAAATCTATTTAGGTAGAGC 122 >seq37892 Length=127 Score = 86.0 bits (94), Expect = 2e-14 Identities = 88/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 89 CTGGAGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAA 148 ||| ||| |||||||| |||||| | ||| |||||||| || | |||||| ||| Sbjct 8 CTGAAGGATCGAACCCATGTATGTTGCATAATACCGGGATGAGTGGTAGCTAGGGGCGAA 67 Query 149 AGGCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGC 203 ||||||| ||| ||| | ||||| || |||| ||||| |||||||||||| || Sbjct 68 AGGCTAATCAAGCTTAGTGTTAGCTAGTACTCTACGAAATCTATTTAGGTAGAGC 122 >seq125428 Length=115 Score = 78.8 bits (86), Expect = 3e-12 Identities = 64/78 (82%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 126 GATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGA 185 |||||| || | ||||||||||||||||| ||| ||| | ||||| ||||||| ||| Sbjct 115 GATGAGTGGTAGCTAGGGGTGAAAGGCTAATCAAGCTTAGTGTTAGCTAGTTCTCTACGA 56 Query 186 AAACTATTTAGGTAGTGC 203 || |||||||||||| || Sbjct 55 AATCTATTTAGGTAGAGC 38 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1685812981248