Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20polyphaga_20[genbank_20GCA_5F000826345.1_202015-01- 08] 224,482 sequences; 120,415,301 total letters Query= AAMG01000370.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq194362 80.6 3e-13 seq186304 80.6 3e-13 seq180639 80.6 3e-13 seq180638 80.6 3e-13 >seq194362 Length=24653 Score = 80.6 bits (88), Expect = 3e-13 Identities = 82/107 (77%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67 ||||||||||| ||| ||||||| ||||||||||||| |||||| |||| | ||| Sbjct 21334 GGTGGATGCCTTGGCAGCAAGAGGCGATGAAGGACGTGATACCCTGCGATAAGCCATGGG 21393 Query 68 GATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCC 114 || | ||| | ||||||| | ||| ||||||||||| ||||| Sbjct 21394 GAGCCGGGAATAGGCTTTGATCCATGGATCTCCGAATGGGGAAACCC 21440 >seq186304 Length=18897 Score = 80.6 bits (88), Expect = 3e-13 Identities = 82/107 (77%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67 ||||||||||| ||| ||||||| ||||||||||||| |||||| |||| | ||| Sbjct 15578 GGTGGATGCCTTGGCAGCAAGAGGCGATGAAGGACGTGATACCCTGCGATAAGCCATGGG 15637 Query 68 GATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCC 114 || | ||| | ||||||| | ||| ||||||||||| ||||| Sbjct 15638 GAGCCGGGAATAGGCTTTGATCCATGGATCTCCGAATGGGGAAACCC 15684 >seq180639 Length=8005 Score = 80.6 bits (88), Expect = 3e-13 Identities = 82/107 (77%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67 ||||||||||| ||| ||||||| ||||||||||||| |||||| |||| | ||| Sbjct 2652 GGTGGATGCCTTGGCAGCAAGAGGCGATGAAGGACGTGATACCCTGCGATAAGCCATGGG 2711 Query 68 GATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCC 114 || | ||| | ||||||| | ||| ||||||||||| ||||| Sbjct 2712 GAGCCGGGAATAGGCTTTGATCCATGGATCTCCGAATGGGGAAACCC 2758 >seq180638 Length=39462 Score = 80.6 bits (88), Expect = 3e-13 Identities = 82/107 (77%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67 ||||||||||| ||| ||||||| ||||||||||||| |||||| |||| | ||| Sbjct 3320 GGTGGATGCCTTGGCAGCAAGAGGCGATGAAGGACGTGATACCCTGCGATAAGCCATGGG 3261 Query 68 GATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCC 114 || | ||| | ||||||| | ||| ||||||||||| ||||| Sbjct 3260 GAGCCGGGAATAGGCTTTGATCCATGGATCTCCGAATGGGGAAACCC 3214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475763117642