Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20polyphaga_20[genbank_20GCA_5F000826345.1_202015-01- 08] 224,482 sequences; 120,415,301 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq213115 205 1e-50 seq215672 93.3 7e-17 >seq213115 Length=3823 Score = 205 bits (226), Expect = 1e-50 Identities = 115/116 (99%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 143 TATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAA 202 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 697 TATTTAGCAGGTTAAGGTCTCGTTCGTTAACGGAATTAACCAGACAAATCACTCCACCAA 638 Query 203 CTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 637 CTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 582 Score = 147 bits (162), Expect = 3e-33 Identities = 103/116 (89%), Gaps = 1/116 (1%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 944 ACTCGTTGGATTAATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 885 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGC-CAATAGTCCCTCTAAGAAGC 116 |||||||||||||||||||||| ||||| | || || |||||||||||||||| Sbjct 884 CCTGTTATTGCCTCAAACTTCCGCTGGCTAGGCGCGCAGCAGTCCCTCTAAGAAGC 829 >seq215672 Length=42019 Score = 93.3 bits (102), Expect = 7e-17 Identities = 68/78 (87%), Gaps = 1/78 (1%) Strand=Plus/Plus Query 40 GAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGC-CA 98 ||||||||||||||||| |||||||||||||||||||||||||| ||||| | ||| | Sbjct 998 GAACATCTAAGGGCATCCCAGACCTGTTATTGCCTCAAACTTCCGCTGGCTAGGAGCGTA 1057 Query 99 ATAGTCCCTCTAAGAAGC 116 ||||||||||| |||| Sbjct 1058 GCAGTCCCTCTAATAAGC 1075 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795067223442