Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acanthamoeba_20polyphaga_20[genbank_20GCA_5F000826345.1_202015-01-
08] 224,482 sequences; 120,415,301 total letters
Query= AAMG01001083.1
Length=339
Score E
Sequences producing significant alignments: (Bits) Value
seq194362 183 6e-44
seq186304 183 6e-44
seq180639 183 6e-44
seq180638 183 6e-44
>seq194362
Length=24653
Score = 183 bits (202), Expect = 6e-44
Identities = 169/214 (79%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 126 GGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCT 185
||| ||||||||||||||||||||||||||||||||||||||||||| | ||| | ||
Sbjct 23491 GGGTAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCGCGAAGGTTGGCT 23550
Query 186 CAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACC 245
||| || ||||| | || ||||||| |||| ||| | ||||||| | ||
Sbjct 23551 CAGAGCGGTCGGAAATCGCTCGTTGAGTGCAATGGCAGAAGCCAGCCTGACTGCAAGACT 23610
Query 246 CTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGC 305
|||||| ||||| |||||||||||| | || |||||||| ||| | || ||||| |||
Sbjct 23611 GACAAGTCGAGCAGAGACGAAAGTCGGCCATAGTGATCCGGTGGTCCCGAGTGGAAGGGC 23670
Query 306 CGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
| |||||| ||||||||||| ||| |||||||||
Sbjct 23671 CATCGCTCAACGGATAAAAGGTACGCTGGGGATA 23704
>seq186304
Length=18897
Score = 183 bits (202), Expect = 6e-44
Identities = 169/214 (79%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 126 GGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCT 185
||| ||||||||||||||||||||||||||||||||||||||||||| | ||| | ||
Sbjct 17735 GGGTAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCGCGAAGGTTGGCT 17794
Query 186 CAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACC 245
||| || ||||| | || ||||||| |||| ||| | ||||||| | ||
Sbjct 17795 CAGAGCGGTCGGAAATCGCTCGTTGAGTGCAATGGCAGAAGCCAGCCTGACTGCAAGACT 17854
Query 246 CTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGC 305
|||||| ||||| |||||||||||| | || |||||||| ||| | || ||||| |||
Sbjct 17855 GACAAGTCGAGCAGAGACGAAAGTCGGCCATAGTGATCCGGTGGTCCCGAGTGGAAGGGC 17914
Query 306 CGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
| |||||| ||||||||||| ||| |||||||||
Sbjct 17915 CATCGCTCAACGGATAAAAGGTACGCTGGGGATA 17948
>seq180639
Length=8005
Score = 183 bits (202), Expect = 6e-44
Identities = 169/214 (79%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 126 GGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCT 185
||| ||||||||||||||||||||||||||||||||||||||||||| | ||| | ||
Sbjct 4809 GGGTAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCGCGAAGGTTGGCT 4868
Query 186 CAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACC 245
||| || ||||| | || ||||||| |||| ||| | ||||||| | ||
Sbjct 4869 CAGAGCGGTCGGAAATCGCTCGTTGAGTGCAATGGCAGAAGCCAGCCTGACTGCAAGACT 4928
Query 246 CTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGC 305
|||||| ||||| |||||||||||| | || |||||||| ||| | || ||||| |||
Sbjct 4929 GACAAGTCGAGCAGAGACGAAAGTCGGCCATAGTGATCCGGTGGTCCCGAGTGGAAGGGC 4988
Query 306 CGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
| |||||| ||||||||||| ||| |||||||||
Sbjct 4989 CATCGCTCAACGGATAAAAGGTACGCTGGGGATA 5022
>seq180638
Length=39462
Score = 183 bits (202), Expect = 6e-44
Identities = 169/214 (79%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 126 GGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCT 185
||| ||||||||||||||||||||||||||||||||||||||||||| | ||| | ||
Sbjct 1163 GGGTAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCGCGAAGGTTGGCT 1104
Query 186 CAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACC 245
||| || ||||| | || ||||||| |||| ||| | ||||||| | ||
Sbjct 1103 CAGAGCGGTCGGAAATCGCTCGTTGAGTGCAATGGCAGAAGCCAGCCTGACTGCAAGACT 1044
Query 246 CTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGC 305
|||||| ||||| |||||||||||| | || |||||||| ||| | || ||||| |||
Sbjct 1043 GACAAGTCGAGCAGAGACGAAAGTCGGCCATAGTGATCCGGTGGTCCCGAGTGGAAGGGC 984
Query 306 CGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
| |||||| ||||||||||| ||| |||||||||
Sbjct 983 CATCGCTCAACGGATAAAAGGTACGCTGGGGATA 950
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 980194688832
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |