Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20polyphaga_20[genbank_20GCA_5F000826345.1_202015-01- 08] 224,482 sequences; 120,415,301 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq194362 102 7e-20 seq186304 102 7e-20 seq180639 102 7e-20 seq180638 102 7e-20 >seq194362 Length=24653 Score = 102 bits (112), Expect = 7e-20 Identities = 70/79 (89%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 82 ACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGTCATCCCC 141 ||||||||| ||||||| ||||| |||| |||||||||||||||||||||||||||| | Sbjct 20227 ACCATTGTAGCACGTGTGTAGCCCAACCCGTAAGGGCCATGAGGACTTGACGTCATCCAC 20168 Query 142 ACCTTCCTCCGGTTTGTCA 160 ||||||||||| || ||| Sbjct 20167 ACCTTCCTCCGACTTATCA 20149 >seq186304 Length=18897 Score = 102 bits (112), Expect = 7e-20 Identities = 70/79 (89%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 82 ACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGTCATCCCC 141 ||||||||| ||||||| ||||| |||| |||||||||||||||||||||||||||| | Sbjct 14471 ACCATTGTAGCACGTGTGTAGCCCAACCCGTAAGGGCCATGAGGACTTGACGTCATCCAC 14412 Query 142 ACCTTCCTCCGGTTTGTCA 160 ||||||||||| || ||| Sbjct 14411 ACCTTCCTCCGACTTATCA 14393 >seq180639 Length=8005 Score = 102 bits (112), Expect = 7e-20 Identities = 70/79 (89%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 82 ACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGTCATCCCC 141 ||||||||| ||||||| ||||| |||| |||||||||||||||||||||||||||| | Sbjct 1545 ACCATTGTAGCACGTGTGTAGCCCAACCCGTAAGGGCCATGAGGACTTGACGTCATCCAC 1486 Query 142 ACCTTCCTCCGGTTTGTCA 160 ||||||||||| || ||| Sbjct 1485 ACCTTCCTCCGACTTATCA 1467 >seq180638 Length=39462 Score = 102 bits (112), Expect = 7e-20 Identities = 70/79 (89%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 82 ACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGTCATCCCC 141 ||||||||| ||||||| ||||| |||| |||||||||||||||||||||||||||| | Sbjct 4427 ACCATTGTAGCACGTGTGTAGCCCAACCCGTAAGGGCCATGAGGACTTGACGTCATCCAC 4486 Query 142 ACCTTCCTCCGGTTTGTCA 160 ||||||||||| || ||| Sbjct 4487 ACCTTCCTCCGACTTATCA 4505 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415095337540