Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20polyphaga_20[genbank_20GCA_5F000826345.1_202015-01- 08] 224,482 sequences; 120,415,301 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq213115 100 3e-19 >seq213115 Length=3823 Score = 100 bits (110), Expect = 3e-19 Identities = 112/147 (76%), Gaps = 12/147 (8%) Strand=Plus/Plus Query 55 CGAATACATTACCATGGAATAATAGAATAGGACG-TGCGGTTCTATTTT--GTAGGTTTC 111 ||||||||||| ||||| ||||| ||||||||| || | ||||||| || ||||| Sbjct 33 CGAATACATTAGCATGGGATAATGGAATAGGACCCTGTCCTCCTATTTTCAGTTGGTTT- 91 Query 112 TAGGACCGCCCG--------TAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAAT 163 | | | ||| | ||||||| |||| ||||||| ||||| | | |||| ||| Sbjct 92 TGGCAGCGCGAGGACTAGGGTAATGATTAATAGGGATAGTTGGGGGCATTAATATTTAAT 151 Query 164 TGTCAAAGGTGAAATTCTTGGATTTAT 190 ||||| ||||||||||||||||||||| Sbjct 152 TGTCAGAGGTGAAATTCTTGGATTTAT 178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 510886569280