Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20polyphaga_20[genbank_20GCA_5F000826345.1_202015-01- 08] 224,482 sequences; 120,415,301 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq224326 75.2 2e-11 seq208559 75.2 2e-11 seq187687 75.2 2e-11 >seq224326 Length=1484 Score = 75.2 bits (82), Expect = 2e-11 Identities = 65/81 (80%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 158 CCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTTGGCCA 217 |||| |||||||| |||||||| ||||| ||| | | ||| ||||||||||| |||||| Sbjct 657 CCTTCTGCTTCTCGAGCAGCTTTCGCTTCCGGGTGATGTCGCCGCCGTAGCACTTGGCCG 598 Query 218 GTACGTTCTTTCTGAGAGCCT 238 |||| ||||| || |||| Sbjct 597 TCACGTCCTTTCGCAGCGCCT 577 >seq208559 Length=972 Score = 75.2 bits (82), Expect = 2e-11 Identities = 65/81 (80%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 158 CCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTTGGCCA 217 |||| |||||||| |||||||| ||||| ||| | | ||| ||||||||||| |||||| Sbjct 115 CCTTCTGCTTCTCGAGCAGCTTTCGCTTCCGGGTGATGTCGCCGCCGTAGCACTTGGCCG 56 Query 218 GTACGTTCTTTCTGAGAGCCT 238 |||| ||||| || |||| Sbjct 55 TCACGTCCTTTCGCAGCGCCT 35 >seq187687 Length=947 Score = 75.2 bits (82), Expect = 2e-11 Identities = 65/81 (80%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 158 CCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTTGGCCA 217 |||| |||||||| |||||||| ||||| ||| | | ||| ||||||||||| |||||| Sbjct 757 CCTTCTGCTTCTCGAGCAGCTTTCGCTTCCGGGTGATGTCGCCGCCGTAGCACTTGGCCG 698 Query 218 GTACGTTCTTTCTGAGAGCCT 238 |||| ||||| || |||| Sbjct 697 TCACGTCCTTTCGCAGCGCCT 677 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 839769798254