Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20polyphaga_20[genbank_20GCA_5F000826345.1_202015-01- 08] 224,482 sequences; 120,415,301 total letters Query= AAMG01002110.1 Length=382 Score E Sequences producing significant alignments: (Bits) Value seq176604 102 2e-19 >seq176604 Length=13482 Score = 102 bits (112), Expect = 2e-19 Identities = 144/201 (72%), Gaps = 11/201 (5%) Strand=Plus/Minus Query 153 ACTTCCAGCATGCGTGCCAGGTTCTCGGCGCGCTCCAGGTAACGCGACATCCAATACAGA 212 || ||||||| ||| || | | |||||||||||||||| || |||||| |||| Sbjct 8080 ACGTCCAGCAGGCGGGCGGCGGTTTCGGCGCGCTCCAGGTGGCGGCCCATCCAGAACAGG 8021 Query 213 TCTGCAGCTGTTCTACGCAGCATACTCAG-CCCTCCA----CC------ACCCAGGTGTC 261 | || || || | | ||||| | | |||||| || ||||||||||| Sbjct 8020 TTGGCGGCAGTGCGGCTGAGCATTGGCTGACCCTCCTTATTCCGACAGGACCCAGGTGTC 7961 Query 262 CTTGGTTCCACCGCCTTGCGACGAGTTGACGACCAGCGAGCCTTCCTTCAGCGCCACGCG 321 |||| || ||||| ||||||||||| || |||||||| ||||| ||| |||||||| Sbjct 7960 CTTGACCCCGCCGCCCTGCGACGAGTTCACCACCAGCGACCCTTCGCGCAGGGCCACGCG 7901 Query 322 GGTCAAGCCACCGGGCACCAG 342 |||| || ||||||||||| Sbjct 7900 CGTCAGCCCGCCGGGCACCAG 7880 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1117485801600