Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20polyphaga_20[genbank_20GCA_5F000826345.1_202015-01- 08] 224,482 sequences; 120,415,301 total letters Query= NC_031120.1 Length=241147 Score E Sequences producing significant alignments: (Bits) Value seq196771 107 3e-18 >seq196771 Length=22834 Score = 107 bits (118), Expect = 3e-18 Identities = 167/239 (70%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 196124 GACCGTACCGGCACAGGCACTACGTCCTATCTCGGCGCACAGATGCGCTTCGATCTGCAA 196183 ||||| ||||| || ||||| | || || |||| ||| |||| |||| | Sbjct 19624 GACCGCACCGGGACGGGCACGATCTCGCATTTCGGGATGCAGTGCCGCTATCCTCTGGAT 19683 Query 196184 GACGGATTCCCGCTGGTCACCACGAAGAAACTCCATCTGCGTTCCATCATTCATGAACTG 196243 | || || ||||||||||| ||||| || || || ||| |||||| | || |||||| Sbjct 19684 CAGGGCTTTCCGCTGGTCACGACGAAAAAGCTGCACCTGAAATCCATCGTCCACGAACTG 19743 Query 196244 CTGTGGTTCCTCAACGGGGACACCAACATCAAGTACCTGAATGACAACGGTGTCTCTATC 196303 ||||||||||| || ||||| |||||| || ||| | | ||||| ||| ||| Sbjct 19744 CTGTGGTTCCTGTCGGGCGACACGAACATCCGCTATCTGCAGCAGAACGGCGTCAGCATC 19803 Query 196304 TGGAACGAGTGGGCGAACGAACTCGGTAACCTGGGGCCGGTTTACGGTAAGCAGTGGCG 196362 ||| |||| |||||| ||| ||| |||| || || || || || | |||||||| Sbjct 19804 TGGGACGAATGGGCGGACGCGAACGGCGACCTCGGCCCTGTCTATGGCCATCAGTGGCG 19862 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 769377432737040