Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20polyphaga_20[genbank_20GCA_5F000826345.1_202015-01- 08] 224,482 sequences; 120,415,301 total letters Query= NC_031906.1 Length=198190 Score E Sequences producing significant alignments: (Bits) Value seq177369 87.8 2e-12 >seq177369 Length=13277 Score = 87.8 bits (96), Expect = 2e-12 Identities = 174/255 (68%), Gaps = 2/255 (1%) Strand=Plus/Minus Query 129023 GCGAAAAACAAGTCTATCGCATTGACCATTATCTTGGCAAAGATACTGTCAATAACATTC 129082 |||||| || |||||||||| |||||||| || ||||| || || ||| | ||| | Sbjct 6754 GCGAAAGCCAGATCTATCGCATCGACCATTACCTGGGCAAGGAAACCGTCCAGAACCTGA 6695 Query 129083 TTGCTACTCGCTTCAGCAACATTCTTCTCGAACCACTTTGGAATCGTCAGTATGTAGAGG 129142 | || |||||| |||||| || |||| || || |||||| | || || || Sbjct 6694 TGGCCGTGCGCTTCGCCAACATGCTGTTCGAGCCGCTGTGGAATTCGCTTTACGTTGACC 6635 Query 129143 AAGTTCAGATCTTCGCTACCGAAACTATCGGTTGCGAAGGACGCTCACAATACTATGAGA 129202 | || |||||| || |||| || | || | || ||| ||||||| || Sbjct 6634 ACGTCCAGATCACCGTGGCCGAGACGGTGGGCGTGGGCGGGCGCGGCGAATACTACGACC 6575 Query 129203 CTGCTGGTGCTGTACGCGACATGCTACAGAACCACATCTTACAAGTTCT-TGCACTCATC 129261 | | ||||| | ||||||||| | ||||||||||| | || |||| ||| || ||| Sbjct 6574 ATTCGGGTGCCATGCGCGACATGGTGCAGAACCACATGATGCAGCTTCTGTGC-CTGATC 6516 Query 129262 GCTATGGAACCTCCC 129276 || ||||| || ||| Sbjct 6515 GCGATGGAGCCGCCC 6501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632300755668000