Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20polyphaga_20[genbank_20GCA_5F001567625.1_202016-02- 24] 18,098 sequences; 49,353,662 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq16584 95.1 1e-17 >seq16584 Length=621 Score = 95.1 bits (104), Expect = 1e-17 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| ||||| ||| || | |||||||||| | | | ||||||||| | Sbjct 481 GGGTCTTTCCGTCCAATCATTTATATACTGCATCTTCACAGCAAATTTAATTTCACTAGG 540 Query 85 CTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGA 144 | | | ||||||| |||||||||| |||||||||||||| |||||| Sbjct 541 TTAATACTGGAGACAGTAGGGAAGTCGTTACACCATTCATGCAGGTCGGAACTCACCCGA 600 Query 145 CAAGGAATTTCGCTACCTTAG 165 ||||||||||||||||||||| Sbjct 601 CAAGGAATTTCGCTACCTTAG 621 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547104062502