Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20polyphaga_20[genbank_20GCA_5F001567625.1_202016-02- 24] 18,098 sequences; 49,353,662 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq17844 77.0 8e-12 >seq17844 Length=519 Score = 77.0 bits (84), Expect = 8e-12 Identities = 99/133 (74%), Gaps = 4/133 (3%) Strand=Plus/Minus Query 266 AGTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCT 325 |||||||| |||||| ||||| ||||||||||||||| ||||||||||||| |||| | Sbjct 168 AGTGAGCTGTTACGCTTTCTTTAAAGGATGGCTGCTTCTAAGCCAACCTCCTAATTGT-T 110 Query 326 ACGCAACTCCACATCCTTTC--CCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCT 383 | ||| || |||| |||| | | | || || | ||||||||| ||| Sbjct 109 ATAACACTTTGAATTATTTCATACACTTAATTA-TTTTTCTGGACTTTAGCTGATATTCT 51 Query 384 GGGCTGTTTCCCT 396 ||||||||||||| Sbjct 50 GGGCTGTTTCCCT 38 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177386877952