Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20polyphaga_20[genbank_20GCA_5F001567625.1_202016-02- 24] 18,098 sequences; 49,353,662 total letters Query= AAMG01001946.1 Length=179 Score E Sequences producing significant alignments: (Bits) Value seq16845 75.2 1e-11 seq16584 75.2 1e-11 seq16254 75.2 1e-11 >seq16845 Length=598 Score = 75.2 bits (82), Expect = 1e-11 Identities = 80/103 (78%), Gaps = 2/103 (2%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||| ||| || |||||||||||||| || | ||||||||||| || |||||| ||| Sbjct 453 GTTAAGCAATAGCCCTTCCATTCAGCACTATTGGATCACTATGGCCGACTTTCGTCTCTG 394 Query 84 -CTCGAGCCGTCACTCT-CGCAGTCAAGCCAGCTTATGCCATT 124 ||||| | |||| ||| | ||||||||| | ||| | ||||| Sbjct 393 ACTCGATCTGTCAATCTACTCAGTCAAGCAATCTTTTACCATT 351 >seq16584 Length=621 Score = 75.2 bits (82), Expect = 1e-11 Identities = 80/103 (78%), Gaps = 2/103 (2%) Strand=Plus/Plus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||| ||| || |||||||||||||| || | ||||||||||| || |||||| ||| Sbjct 129 GTTAAGCAATAGCCCTTCCATTCAGCACTATTGGATCACTATGGCCGACTTTCGTCTCTG 188 Query 84 -CTCGAGCCGTCACTCT-CGCAGTCAAGCCAGCTTATGCCATT 124 ||||| | |||| ||| | ||||||||| | ||| | ||||| Sbjct 189 ACTCGATCTGTCAATCTACTCAGTCAAGCAATCTTTTACCATT 231 >seq16254 Length=654 Score = 75.2 bits (82), Expect = 1e-11 Identities = 80/103 (78%), Gaps = 2/103 (2%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||| ||| || |||||||||||||| || | ||||||||||| || |||||| ||| Sbjct 364 GTTAAGCAATAGCCCTTCCATTCAGCACTATTGGATCACTATGGCCGACTTTCGTCTCTG 305 Query 84 -CTCGAGCCGTCACTCT-CGCAGTCAAGCCAGCTTATGCCATT 124 ||||| | |||| ||| | ||||||||| | ||| | ||||| Sbjct 304 ACTCGATCTGTCAATCTACTCAGTCAAGCAATCTTTTACCATT 262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 473516966376