Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20polyphaga_20[genbank_20GCA_5F001567625.1_202016-02- 24] 18,098 sequences; 49,353,662 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq16254 136 6e-30 seq16845 77.0 5e-12 >seq16254 Length=654 Score = 136 bits (150), Expect = 6e-30 Identities = 102/120 (85%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 156 GACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAAT 215 ||| |||||| ||||||||||||| ||||||||| |||||| ||| ||| || ||||||| Sbjct 557 GACAGATAGGAACCGAACTGTCTCACGACGTTCTAAACCCAACTCACGTACCACTTTAAT 498 Query 216 GGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 ||||||||||| ||||||||| ||| || |||| |||||||| || ||| |||||||| Sbjct 497 AGGCGAACAGCCTAACCCTTGGAACCGCCTGCAGCTCCAGGATGTGATGAGTCGACATCG 438 >seq16845 Length=598 Score = 77.0 bits (84), Expect = 5e-12 Identities = 59/70 (84%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 206 CCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGA 265 || ||||||| ||||||||||| ||||||||| ||| || |||| |||||||| || || Sbjct 596 CCACTTTAATAGGCGAACAGCCTAACCCTTGGAACCGCCTGCAGCTCCAGGATGTGATGA 537 Query 266 GCCGACATCG 275 | |||||||| Sbjct 536 GTCGACATCG 527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780663106728