Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20polyphaga_20[genbank_20GCA_5F001567625.1_202016-02- 24] 18,098 sequences; 49,353,662 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq17842 95.1 4e-17 seq17995 77.0 1e-11 >seq17842 Length=519 Score = 95.1 bits (104), Expect = 4e-17 Identities = 117/160 (73%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 34 AGACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGA 93 |||| ||| || ||| |||||| | ||||| |||| || | ||| ||| ||| | Sbjct 303 AGACTCGATACTAAGCGATCTATTTACTGCCAGATTGAAAGTACTTTAATACGTACTGAA 244 Query 94 GGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCT 153 || |||||||| |||||| | ||| |||||||| || | ||||||||||||||| Sbjct 243 GGATCGAACCCATGTATGTTGCATAATACCGGGATGAGTGGTAGCTAGGGGTGAAAGGCT 184 Query 154 AAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATT 193 || ||| ||| | ||||| || |||| ||||| ||||| Sbjct 183 AATCAAGCTTAGTGTTAGCTAGTACTCTACGAAATCTATT 144 >seq17995 Length=508 Score = 77.0 bits (84), Expect = 1e-11 Identities = 95/130 (73%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 34 AGACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGA 93 |||| ||| || ||| |||||| | ||||| |||| || | ||| ||| ||| | Sbjct 131 AGACTCGATACTAAGCGATCTATTTACTGCCAGATTGAAAGTACTTTAATACGTACTGAA 72 Query 94 GGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCT 153 || |||||||| |||||| | ||| |||||||| || | ||||||||||||||| Sbjct 71 GGATCGAACCCATGTATGTTGCATAATACCGGGATGAGTGGTAGCTAGGGGTGAAAGGCT 12 Query 154 AAACAAACTT 163 || ||| ||| Sbjct 11 AATCAAGCTT 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689294216192