Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acanthamoeba_20quina_20[genbank_20GCA_5F000826445.1_202015-01-07]
60,490 sequences; 83,589,038 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq58397 194 3e-47
seq60037 107 3e-21
>seq58397
Length=2976
Score = 194 bits (214), Expect = 3e-47
Identities = 130/141 (92%), Gaps = 3/141 (2%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| |
Sbjct 776 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 833
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTT-CAAAGATT 119
||||||||||| ||| |||| |||||||||||||||| |||||| |||||| ||||||||
Sbjct 834 CTCGTTGAAGATCAATAATTACAATGATCTATCCCCAGCACGATTAAATTTGCAAAGATT 893
Query 120 ACCCGGACCTGTCGGCCAAGG 140
|||||||||| |||||| |||
Sbjct 894 ACCCGGACCTATCGGCCCAGG 914
Score = 140 bits (154), Expect = 5e-31
Identities = 85/89 (96%), Gaps = 1/89 (1%)
Strand=Plus/Plus
Query 146 GACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 205
||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 978 GACTCGTTGGATTAATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 1037
Query 206 ACCTGTTATTGCCTCAAACTTCCG-TGGC 233
|||||||||||||||||||||||| ||||
Sbjct 1038 ACCTGTTATTGCCTCAAACTTCCGCTGGC 1066
>seq60037
Length=20208
Score = 107 bits (118), Expect = 3e-21
Identities = 66/69 (96%), Gaps = 1/69 (1%)
Strand=Plus/Plus
Query 166 GTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
Sbjct 17662 GTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCCCAGACCTGTTATTGCCTCAAAAT 17721
Query 226 TCCG-TGGC 233
|||| ||||
Sbjct 17722 TCCGCTGGC 17730
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751559330350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |