Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acanthamoeba_20quina_20[genbank_20GCA_5F000826445.1_202015-01-07]
60,490 sequences; 83,589,038 total letters
Query= AAMG01000538.1
Length=248
Score E
Sequences producing significant alignments: (Bits) Value
seq33589 98.7 1e-18
seq59117 86.0 9e-15
seq13312 78.8 1e-12
>seq33589
Length=127
Score = 98.7 bits (108), Expect = 1e-18
Identities = 79/94 (84%), Gaps = 1/94 (1%)
Strand=Plus/Plus
Query 7 CTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACCT 66
||| || ||||||||||| ||||| || ||||||||| |||| ||| ||| | |||
Sbjct 13 CTTTCAGCACCGGGCAGGTGTCAGACCCTATACATCGTTTTACAA-CTTAGCAGAGTCCT 71
Query 67 GTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCT 100
|||||||||||||||||||||| |||||||||||
Sbjct 72 GTGTTTTTAGTAAACAGTCGCTACCCTCTATTCT 105
>seq59117
Length=9635
Score = 86.0 bits (94), Expect = 9e-15
Identities = 72/87 (83%), Gaps = 1/87 (1%)
Strand=Plus/Minus
Query 14 CACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACCTGTGTTTT 73
||| ||||||| ||||| || ||||||||| |||| ||| || | ||||||||||
Sbjct 1919 CACTGGGCAGGTGTCAGACCCTATACATCGTTTTACAA-CTTAGCGGAGTCCTGTGTTTT 1861
Query 74 TAGTAAACAGTCGCTTCCCTCTATTCT 100
||||||||||||||| |||||||||||
Sbjct 1860 TAGTAAACAGTCGCTACCCTCTATTCT 1834
>seq13312
Length=127
Score = 78.8 bits (86), Expect = 1e-12
Identities = 63/75 (84%), Gaps = 1/75 (1%)
Strand=Plus/Minus
Query 26 GTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACCTGTGTTTTTAGTAAACAGTC 85
||||| || ||||||||| |||| ||| || | ||||||||||||||||||||||
Sbjct 126 GTCAGACCCTATACATCGTTTTACAA-CTTAGCGGAGTCCTGTGTTTTTAGTAAACAGTC 68
Query 86 GCTTCCCTCTATTCT 100
|||||||||||||||
Sbjct 67 GCTTCCCTCTATTCT 53
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 693993083770
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |