Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20quina_20[genbank_20GCA_5F000826445.1_202015-01-07] 60,490 sequences; 83,589,038 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq59117 107 5e-21 seq5444 93.3 1e-16 seq33589 77.0 8e-12 >seq59117 Length=9635 Score = 107 bits (118), Expect = 5e-21 Identities = 135/183 (74%), Gaps = 7/183 (4%) Strand=Plus/Minus Query 97 TACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGG 156 ||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||| | | Sbjct 2022 TACCCGACAAGGAATGTCGCTACCTTAGGACCGTTATGGTTACAGCCGCCGTTTACTGAG 1963 Query 157 GCTTCGATCAAGAGCTTCGCGTTAGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAG 216 || || | || | | || | || || | || || |||| |||||| Sbjct 1962 ATTTATATTCATGGCATTTC--TA-CCAATCCTTTTTGTT----TTTAAGCACTGGGCAG 1910 Query 217 GCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGT 276 | |||| ||||||||| || || | || || |||| ||||||||||| |||||||| Sbjct 1909 GTGTCAGACCCTATACATCGTTTTACAACTTAGCGGAGTCCTGTGTTTTTAGTAAACAGT 1850 Query 277 CGC 279 ||| Sbjct 1849 CGC 1847 >seq5444 Length=183 Score = 93.3 bits (102), Expect = 1e-16 Identities = 54/56 (96%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 97 TACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTACGGCCGCCGTTTAC 152 ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct 79 TACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATGGTTACAGCCGCCGTTTAC 24 >seq33589 Length=127 Score = 77.0 bits (84), Expect = 8e-12 Identities = 65/80 (81%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 200 CTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAGTGCTG 259 ||| | |||||||||||| |||| ||||||||| || || | || ||||||| ||| Sbjct 13 CTTTCAGCACCGGGCAGGTGTCAGACCCTATACATCGTTTTACAACTTAGCAGAGTCCTG 72 Query 260 TGTTTTTAATAAACAGTCGC 279 |||||||| ||||||||||| Sbjct 73 TGTTTTTAGTAAACAGTCGC 92 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260037342080