Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20quina_20[genbank_20GCA_5F000826445.1_202015-01-07] 60,490 sequences; 83,589,038 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq59117 132 1e-28 >seq59117 Length=9635 Score = 132 bits (146), Expect = 1e-28 Identities = 144/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 298 GACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAA 357 || || |||||||||| ||| || ||| ||||||||||||||| ||||||||| | Sbjct 6161 GAGGAAGTCAAATCATTATGGCCTATATAGGTTGGGCTACACACGTACTACAATGGTAAT 6220 Query 358 TACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGA 417 ||||| | | ||| ||| ||||| | ||| |||| ||| || || ||||| || Sbjct 6221 TACAATGTGAAGCAAAAATGCGAGTTTTAGCTAATCATTAAAAATTAACCTTAGTTCTGA 6280 Query 418 TTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGC 477 || | ||||||| |||| ||||||| ||||||||||||||||| ||| || |||| Sbjct 6281 TTATTCTCTGCAAGTCGAGAGTATGAAGTAGGAATCGCTAGTAATCGCAGAATAGAATGC 6340 Query 478 TACGGTGAATA 488 | ||||||||| Sbjct 6341 TGCGGTGAATA 6351 Score = 98.7 bits (108), Expect = 3e-18 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 ||||||||||||||| |||||||||| || |||||| | | ||||||||||| || Sbjct 5839 TACGACCGCAAGGTTAAAACTCAAAGAAACTGACGGAAGATTGTATAAGCGGTGGAGTAT 5898 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGA 104 ||||||||||| || ||||| ||||| |||||||| ||||| Sbjct 5899 GTGGTTTAATTTGATATAACGCAAAGAATCTTACCAACCCTTGA 5942 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503090230400