Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20quina_20[genbank_20GCA_5F000826445.1_202015-01-07] 60,490 sequences; 83,589,038 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq59117 102 2e-19 >seq59117 Length=9635 Score = 102 bits (112), Expect = 2e-19 Identities = 115/150 (77%), Gaps = 3/150 (2%) Strand=Plus/Minus Query 12 ATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT-GGGC 70 |||| | |||| |||||||| ||||| | ||||||||||| | ||| || || |||| Sbjct 5381 ATCAAGCTTTCGCCCATTGTCAAATATTCTCCACTGCTGCC-CTTTTAGAAGACTTGGGC 5323 Query 71 CGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTG 130 ||| | |||||||||||||||| | ||| |||||| || |||| |||||||||||| Sbjct 5322 CGTTT-TCAGTCCCAATGTGGCTGATCATTCTCTCAAACCAGCTAAGCATCGTCGGCTTG 5264 Query 131 GTGGGCTATTATCTCACCAACTACCTAATC 160 || |||| || ||||||||||||| Sbjct 5263 TTGAATAATTACTACAACAACTACCTAATC 5234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 997796067840