Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20quina_20[genbank_20GCA_5F000826445.1_202015-01-07] 60,490 sequences; 83,589,038 total letters Query= AAMG01001674.1 Length=313 Score E Sequences producing significant alignments: (Bits) Value seq59250 77.0 6e-12 seq55853 77.0 6e-12 seq45411 77.0 6e-12 >seq59250 Length=4571 Score = 77.0 bits (84), Expect = 6e-12 Identities = 59/70 (84%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 107 TACAATCCGCCAAAGGTTGCAGGCAAGGACGATGTGACCGGCGAAGACCTGGTACAGCGC 166 ||||||||||| ||||| || ||||||||||| || ||||||||| ||| || || ||| Sbjct 755 TACAATCCGCCCAAGGTGGCCGGCAAGGACGACGTCACCGGCGAACCCCTCGTCCAACGC 696 Query 167 AAGGACGACa 176 ||||||||| Sbjct 695 GAGGACGACA 686 >seq55853 Length=4884 Score = 77.0 bits (84), Expect = 6e-12 Identities = 59/70 (84%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 107 TACAATCCGCCAAAGGTTGCAGGCAAGGACGATGTGACCGGCGAAGACCTGGTACAGCGC 166 ||||||||||| ||||| || ||||||||||| || ||||||||| ||| || || ||| Sbjct 4803 TACAATCCGCCCAAGGTGGCCGGCAAGGACGACGTCACCGGCGAACCCCTCGTCCAACGC 4744 Query 167 AAGGACGACa 176 ||||||||| Sbjct 4743 GAGGACGACA 4734 >seq45411 Length=1006 Score = 77.0 bits (84), Expect = 6e-12 Identities = 59/70 (84%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 107 TACAATCCGCCAAAGGTTGCAGGCAAGGACGATGTGACCGGCGAAGACCTGGTACAGCGC 166 ||||||||||| ||||| || ||||||||||| || ||||||||| ||| || || ||| Sbjct 755 TACAATCCGCCCAAGGTGGCCGGCAAGGACGACGTCACCGGCGAACCCCTCGTCCAACGC 696 Query 167 AAGGACGACa 176 ||||||||| Sbjct 695 GAGGACGACA 686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 898656073920