Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20quina_20[genbank_20GCA_5F000826445.1_202015-01-07] 60,490 sequences; 83,589,038 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq37432 87.8 3e-15 seq25207 84.2 4e-14 seq36894 73.4 7e-11 >seq37432 Length=87 Score = 87.8 bits (96), Expect = 3e-15 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 || ||||| | ||||||||||||| | ||| || ||||| |||||| || ||||||||| Sbjct 7 CCACCTACGCACCCTTTACACCCAGTCAATGCGAATAACACTTGCCCTCTCCGTATTACC 66 Query 248 GCGGCTGCTGGCACGTAGTTA 268 ||| ||||||||||| ||||| Sbjct 67 GCGACTGCTGGCACGAAGTTA 87 >seq25207 Length=81 Score = 84.2 bits (92), Expect = 4e-14 Identities = 67/81 (83%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 || ||||| | |||||| |||||| | ||| || ||||| |||||| || ||||||||| Sbjct 1 CCACCTACGCACCCTTTGCACCCAGTCAATGCGAATAACACTTGCCCTCTCCGTATTACC 60 Query 248 GCGGCTGCTGGCACGTAGTTA 268 ||| ||||||||||| ||||| Sbjct 61 GCGACTGCTGGCACGAAGTTA 81 >seq36894 Length=73 Score = 73.4 bits (80), Expect = 7e-11 Identities = 60/73 (82%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 206 CACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCGGCTGCTGGCACGTAG 265 |||||| | ||| || ||||| |||||| || |||||||||||| ||||||||||| || Sbjct 1 CACCCAGTCAATGCGAATAACACTTGCCCTCTCCGTATTACCGCGACTGCTGGCACGAAG 60 Query 266 TTAGCCGTGGCTT 278 |||| | ||||| Sbjct 61 TTAGTCAGGGCTT 73 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828314325790