Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20quina_20[genbank_20GCA_5F000826445.1_202015-01-07] 60,490 sequences; 83,589,038 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq59117 78.8 7e-13 >seq59117 Length=9635 Score = 78.8 bits (86), Expect = 7e-13 Identities = 88/115 (77%), Gaps = 2/115 (2%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 ||||||||||||||| ||| || ||||||||||||| | | ||||||||||| || Sbjct 3780 TACCTTTTATCCGTTAAGCAATAGCCCTTCCATTCAGCACTATTGGATCACTATGGCCGA 3721 Query 61 CTTTCGCATCTG-CTCTAGTTGTTGCTCT-CGCAATCAAGCACACTTTTGCCATT 113 |||||| |||| ||| | ||| ||| | || ||||||| ||||| ||||| Sbjct 3720 CTTTCGTCTCTGACTCGATCTGTCAATCTACTCAGTCAAGCAATCTTTTACCATT 3666 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351800383000