Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acanthamoeba_20quina_20[genbank_20GCA_5F000826445.1_202015-01-07]
60,490 sequences; 83,589,038 total letters
Query= AAMG01002055.1
Length=294
Score E
Sequences producing significant alignments: (Bits) Value
seq53155 75.2 2e-11
seq39598 75.2 2e-11
>seq53155
Length=1493
Score = 75.2 bits (82), Expect = 2e-11
Identities = 65/81 (80%), Gaps = 0/81 (0%)
Strand=Plus/Plus
Query 158 CCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTTGGCCA 217
|||| |||||||| |||||||| ||||| ||| | | ||| ||||||||||| ||||||
Sbjct 1144 CCTTCTGCTTCTCGAGCAGCTTTCGCTTCCGGGTGATGTCGCCGCCGTAGCACTTGGCCG 1203
Query 218 GTACGTTCTTTCTGAGAGCCT 238
|||| ||||| || ||||
Sbjct 1204 TCACGTCCTTTCGCAGCGCCT 1224
>seq39598
Length=1825
Score = 75.2 bits (82), Expect = 2e-11
Identities = 65/81 (80%), Gaps = 0/81 (0%)
Strand=Plus/Minus
Query 158 CCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTTGGCCA 217
|||| |||||||| |||||||| ||||| ||| | | ||| ||||||||||| ||||||
Sbjct 669 CCTTCTGCTTCTCGAGCAGCTTTCGCTTCCGGGTGATGTCGCCGCCGTAGCACTTGGCCG 610
Query 218 GTACGTTCTTTCTGAGAGCCT 238
|||| ||||| || ||||
Sbjct 609 TCACGTCCTTTCGCAGCGCCT 589
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 837892851840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |