Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20quina_20[genbank_20GCA_5F000826445.1_202015-01-07] 60,490 sequences; 83,589,038 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq59117 111 4e-22 >seq59117 Length=9635 Score = 111 bits (122), Expect = 4e-22 Identities = 136/181 (75%), Gaps = 5/181 (3%) Strand=Plus/Minus Query 19 GCCTTCT--TCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCC 76 ||||||| ||| |||| ||| || |||| |||| |||||||||| ||||||| Sbjct 5411 GCCTTCTGATCACCCACGTAACATTACTCGATCAAGCTTTCGCCCATTGTCAAATATTCT 5352 Query 77 CCACTGCTGCCTCCCGTAGGAGTC-TGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATC 135 ||||||||||| | ||| || | ||| |||| | ||||| ||| |||||||| |||| Sbjct 5351 CCACTGCTGCC-CTTTTAGAAGACTTGGGCCGT-TTTCAGTCCCAATGTGGCTGATCATT 5294 Query 136 CTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCAACTAGCTAATC 195 |||||| |||||||| | ||||||| || | || ||||| | |||||| |||||| Sbjct 5293 CTCTCAAACCAGCTAAGCATCGTCGGCTTGTTGAATAATTACTACAACAACTACCTAATC 5234 Query 196 C 196 | Sbjct 5233 C 5233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1221660570240