Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20quina_20[genbank_20GCA_5F000826445.1_202015-01-07] 60,490 sequences; 83,589,038 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq58743 461 2e-127 seq59629 251 2e-64 seq57112 246 1e-62 seq31197 221 4e-55 seq9680 174 5e-41 seq14987 163 9e-38 seq3871 159 1e-36 seq8436 125 2e-26 seq29641 114 4e-23 seq40910 100 9e-19 >seq58743 Length=2429 Score = 461 bits (510), Expect = 2e-127 Identities = 282/300 (94%), Gaps = 0/300 (0%) Strand=Plus/Plus Query 234 CGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCT 293 || |||||||||||||||| |||| |||||||||||||| |||||||||||||||| Sbjct 1551 CGCCTCCCACTTATTCTACGCCTCCAGCGTCATTTCACAAAGCTGGACTAGAGTCAAGCT 1610 Query 294 CAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGC 353 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1611 CAACAGGGTCTTCTTTCCCCGCTGATTGTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGC 1670 Query 354 TAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAG 413 | | | ||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1671 TGGGTGGTAGATAGGGACAGTGGGAATCTTGTTAATCCATTCATGCGCGTCACTAATTAG 1730 Query 414 ATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCT 473 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1731 ATGATGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCTGCGCT 1790 Query 474 TGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1791 TGGTTGAATCTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCATCAACA 1850 Score = 147 bits (162), Expect = 7e-33 Identities = 101/114 (89%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| || ||| ||||||||||||||| |||| | ||||||||||||||||||| Sbjct 1224 CTTTTGTTCCACATGAGATTTCTGTTCTCATTGAGCTCATCTTAGGACACCTGCGTTATC 1283 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACC 120 |||||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct 1284 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACTATGTCCTCAACC 1337 >seq59629 Length=15804 Score = 251 bits (278), Expect = 2e-64 Identities = 169/194 (87%), Gaps = 21/194 (11%) Strand=Plus/Minus Query 340 GGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGC 399 ||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||| Sbjct 280 GGCTGTGGTTTCGCTGGGTGGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGC 221 Query 400 GCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGC 459 ||||||||||||||||||||||||||||||||| |||||| Sbjct 220 GCGTCACTAATTAGATGACGAGGCATTTGGCTA---------------------TCCCGC 182 Query 460 CGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATC 519 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 181 CGTTTACCCGCGCTTGGTTGAATCTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATC 122 Query 520 ACATTGCGTCAACA 533 |||||||||||||| Sbjct 121 ACATTGCGTCAACA 108 >seq57112 Length=517 Score = 246 bits (272), Expect = 1e-62 Identities = 156/169 (92%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 234 CGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCT 293 || |||||||||||||||| |||| |||||||||||||| ||||||||||||||||| Sbjct 349 CGCCTCCCACTTATTCTACGCCTCCAGCGTCATTTCACAAAGCCGGACTAGAGTCAAGCT 408 Query 294 CAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGC 353 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 409 CAACAGGGTCTTCTTTCCCCGCTGATCGTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGC 468 Query 354 TAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCG 402 | | | ||||||||||||||||||||||||||||||||||||||||||| Sbjct 469 TGGGTGGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCG 517 >seq31197 Length=127 Score = 221 bits (244), Expect = 4e-55 Identities = 125/127 (98%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 389 TCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATA 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 127 TCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATA 68 Query 449 GTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACT 508 ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 67 GTTCCTCCCGCCGTTTACCCGCGCTTGGTTGAATCTCTTCACTTTGACATTCAGAGCACT 8 Query 509 GGGCAGA 515 ||||||| Sbjct 7 GGGCAGA 1 >seq9680 Length=168 Score = 174 bits (192), Expect = 5e-41 Identities = 102/106 (96%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 425 TTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTT 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1 TTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATCT 60 Query 485 CTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCA 530 ||| ||||||||||||||||||||||||||||| |||||||| ||| Sbjct 61 CTTGACTTTGACATTCAGAGCACTGGGCAGAAACCACATTGCTTCA 106 >seq14987 Length=90 Score = 163 bits (180), Expect = 9e-38 Identities = 90/90 (100%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 389 TCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATA 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 90 TCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATA 31 Query 449 GTTACTCCCGCCGTTTACCCGCGCTTGGTT 478 |||||||||||||||||||||||||||||| Sbjct 30 GTTACTCCCGCCGTTTACCCGCGCTTGGTT 1 >seq3871 Length=91 Score = 159 bits (176), Expect = 1e-36 Identities = 90/91 (99%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 425 TTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTT 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 91 TTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATCT 32 Query 485 CTTCACTTTGACATTCAGAGCACTGGGCAGA 515 ||||||||||||||||||||||||||||||| Sbjct 31 CTTCACTTTGACATTCAGAGCACTGGGCAGA 1 >seq8436 Length=72 Score = 125 bits (138), Expect = 2e-26 Identities = 71/72 (99%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 416 GACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTG 475 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 72 GACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTG 13 Query 476 GTTGAATTTCTT 487 ||||||| |||| Sbjct 12 GTTGAATCTCTT 1 >seq29641 Length=123 Score = 114 bits (126), Expect = 4e-23 Identities = 63/63 (100%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 416 GACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTG 475 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 GACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTG 120 Query 476 GTT 478 ||| Sbjct 121 GTT 123 >seq40910 Length=2976 Score = 100 bits (110), Expect = 9e-19 Identities = 60/63 (95%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCA 536 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 2243 TTGAATCTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCG 2302 Query 537 CTT 539 ||| Sbjct 2303 CTT 2305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634210867520