Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20quina_20[genbank_20GCA_5F000826445.1_202015-01-07] 60,490 sequences; 83,589,038 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq5444 82.4 3e-13 seq59117 78.8 3e-12 >seq5444 Length=183 Score = 82.4 bits (90), Expect = 3e-13 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 415 TACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTG 472 |||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||| Sbjct 79 TACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATGGTTACAGCCGCCGTTTACTG 22 >seq59117 Length=9635 Score = 78.8 bits (86), Expect = 3e-12 Identities = 52/58 (90%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 415 TACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTG 472 ||||||||||||||| |||||||||||||| ||||| ||||| ||||||||||||| Sbjct 2022 TACCCGACAAGGAATGTCGCTACCTTAGGACCGTTATGGTTACAGCCGCCGTTTACTG 1965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1701370218240