Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acanthamoeba_20quina_20[genbank_20GCA_5F000826445.1_202015-01-07]
60,490 sequences; 83,589,038 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq58397 482 7e-134
seq58916 105 2e-20
>seq58397
Length=2976
Score = 482 bits (534), Expect = 7e-134
Identities = 450/574 (78%), Gaps = 71/574 (12%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAA-GAGC-CCTGTATCAGTATTTATTGTCACTAC 58
|||||||||||||||||||||| | | |||| ||||||| ||||||||||||||||
Sbjct 2290 GTACTCATTCCAATTACAAGACTCTTATCGAGCGCCTGTATTGTTATTTATTGTCACTAC 2349
Query 59 CTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCG 118
|||||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct 2350 CTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTAGAAGTGGTAGCCA 2409
Query 119 TTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGG 178
||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct 2410 TTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTTACCCGTTACGACCATGG 2469
Query 179 TAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCG- 237
|||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct 2470 TAGGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAATCGTCGCCGC 2529
Query 238 --GCTCAAGG-------CCATGCGATTCGTTA-AGTTATTATGAATCACCAAGGAG---- 283
| ||||| ||||||| || | ||||| ||||||||||| |||||
Sbjct 2530 CCCCACAAGGAGGGCATGAATGCGATCCGAAAGAGTTACTATGAATCACC-AGGAGTTGA 2588
Query 284 CCCCGAAG--GGC-GTTGGTTTTTTATCTAATAAATACACCCCT-------TCCGAAG-- 331
||| | ||| | |||||||| | |||||||||||| |||| | ||| |
Sbjct 2589 AGCCGTTGCCGGCTGCTGGTTTTTAACCTAATAAATACATCCCTCTGCGCATGCGAGGAC 2648
Query 332 ---------------------------TCGGGGTTTTTAGCATGTATTAGCTCTAGAATT 364
||||| || |||||||||||||||||||||
Sbjct 2649 GAGGCCGTGAAGCCCCGCCCCCCGCGCTCGGGACCTTGCGCATGTATTAGCTCTAGAATT 2708
Query 365 ACCACGGTTATCCATGTAG-------------TAAGGTACTATCAAATAAACGATAACTG 411
|||||||||||||| |||| ||| || ||||||||||| |||||||
Sbjct 2709 ACCACGGTTATCCAAGTAGGTAAAAAAAGACAAAAGAGACCATCAAATAAACTATAACTG 2768
Query 412 ATTTAATGAGCCATTCGCAGTTTCACTGTATAGA-TTGCTTATACTTAGACATGCATGGC 470
|||||||||||||| |||||| || | ||||| | |||||||||||||||||||||||
Sbjct 2769 ATTTAATGAGCCATCCGCAGTCTCGCCGTATAAACAAGCTTATACTTAGACATGCATGGC 2828
Query 471 TTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||||||||||||
Sbjct 2829 TTAATCTTTGAGACAAGCATATGACTACTGGCAG 2862
>seq58916
Length=9955
Score = 105 bits (116), Expect = 2e-20
Identities = 97/121 (80%), Gaps = 4/121 (3%)
Strand=Plus/Minus
Query 367 CACGGTTATCCATGTAGT---AAGGTACTATCAAATAAACGATAACTGATTTAATGAGCC 423
|| ||||||||| |||| ||| || ||| |||||| |||||||||||||||||||
Sbjct 6901 CAGGGTTATCCAAGTAGGTACAAGAGACCATCTCATAAACTATAACTGATTTAATGAGCC 6842
Query 424 ATTCGCAGTTTCACTGTATAGATT-GCTTATACTTAGACATGCATGGCTTAATCTTTGAG 482
|| | ||| | ||||| | | ||||||||| |||||||||||||||||||||||||
Sbjct 6841 ATCTGGAGTGTTGCTGTAAAAACAAGCTTATACTGAGACATGCATGGCTTAATCTTTGAG 6782
Query 483 A 483
|
Sbjct 6781 A 6781
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1509486359040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |